| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2118 |
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| Symbol | |
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| ID | 3934571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2126562 |
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| End bp | 2128235 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904474 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_510060 |
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| Protein GI | 89054609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.34557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG AACTCTACAA ACGTCTTGTC GCGGCCCAGG TAAGCCGTCG AACAATGCTC
AAAGGGGCGG CCAGCGTCAG CGCATTGGCC GCATCCAGCG GCCTGATGCC GGGCTTGGCC
CTCGCCGATG GGCACGCCAA TGTGCGCGAG CAAATCCTCG CCATTCCGGG CGTCGGCATG
GGCAGCCCGA CGGACGCCGA TTGGCAGGCC GTCGGCGAAT TGTGCCTGGG CTCCACGCGG
GCGCGCTTCG CCGAGGGGGA ATTTGAGGGC GTTGAGCTGA CCTTCATGGG CCTCAACAAC
CAGAACCTGC ACAATTTCCT GTTCCGCGGG TTCCTGCGGC CTTGGGAGGA ATACACCGGC
GCGACGATCA ACTGGATCGA CCTTGCGCAG GCCGATTACA ATGCGCGCCT GCAGCAATCA
ATCGCCACGG GCACGGTCGA TTTCGACATC ATCGAGATGG GCGCCCCGTT TGAGGGCGAC
ACCGCTGGTC GCGGGCTGCT GGATCCGATG CCCGATTGGG TCAAGGAAGA CATCGATATG
GATGATTATG TCGGCTACCT ACAGGAGCCG GTGGGCACCT GGGCGGGAGA GACATATCGC
GTCTCGATTG ATGGCGACTG CCACAACTTC AACTACCGCA CCGACTATTT TGCCAACGAA
GACTTCGCTG CGGCCTGGGC CGAGGAGGGC CATGAGGGTC CGTGGGAAGT GCCAACGACC
TGGCAGAAGG TGCAGGAAGT CAGCAGCTTC CTGGCCGGAA AGGACGACCC GTTCACCGGT
CTGCAGGCCC ATGGCTACCT GGATCCGCTG AAGGGTTGGG GCGGCTTCGG CTTCTACTTC
CTGGCCAGCC GCGCCACGGC CTACGCCAAG CACCCGGACG ATCCCGCGTG GCTCTTCGAC
CCCGAAGACA TGACACCGCG CGTCAACAAC TCAGCCTGGG TCCGGGCCAT CCAGGATGTC
GTGGACATCA TGGACACGCA GCCCGCCGAC CAGATCAACG CAGATCCCGG CACCACCGGC
TTCCAACAGT TCCTGGCCGG AACCGGGTCA ATGCTCAGCT GGTGGGGGGA TATCGGATCG
TCCGCACGCA CATCGGACAC GTCAGTGGTG GGTGATGTGG TGGGCTTCTC GATCCTGCCG
GGATCGGATG ATGTCTGGAA CAGCGCCACG CAGACATGGG ATGTCCTGCC CGACGGGCCG
AACTTCGCAC CGAACATGGC CTATATCGGG TGGGGCATCT ACGTCATGGC CCGTGCTGCC
GAAGGTGGAG ACCTCAAGCG CAGGGCTGCG TGGTCGGCCG CGGCACATCT GGGCGGGCGT
GACCTGTCGC TGTGGTGTTC CGCCTATCCG TCGGGCTTCC AGCCCTACCG CAACTCGCAC
TTCAATATCG ATGAGTGGGA AGCAGCGGGT TATGACCGGG CGTTCATCGA GGATTACCTC
GGGTCTGAGG CCGACAGCTA CAACCACCCC AACGCGGCCA TTGAACCCCG CATTCCCGGC
ATCTTCCAGT ATTACTCGGT GGCCGAGGAC GAGTTGGCCA AGATCTATGC CGGCGAATAC
GGCAGCGTGC AGGAAGGGGC CGATGCGATT GCGGCGGCCT GGGACGCGAT CACCGATCAG
ATCGGACGCG ACAGCCAGGT CGCGCTTTAT CGCTCCTCGC TTGGCCTTGA ATAG
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| Protein sequence | MKVELYKRLV AAQVSRRTML KGAASVSALA ASSGLMPGLA LADGHANVRE QILAIPGVGM
GSPTDADWQA VGELCLGSTR ARFAEGEFEG VELTFMGLNN QNLHNFLFRG FLRPWEEYTG
ATINWIDLAQ ADYNARLQQS IATGTVDFDI IEMGAPFEGD TAGRGLLDPM PDWVKEDIDM
DDYVGYLQEP VGTWAGETYR VSIDGDCHNF NYRTDYFANE DFAAAWAEEG HEGPWEVPTT
WQKVQEVSSF LAGKDDPFTG LQAHGYLDPL KGWGGFGFYF LASRATAYAK HPDDPAWLFD
PEDMTPRVNN SAWVRAIQDV VDIMDTQPAD QINADPGTTG FQQFLAGTGS MLSWWGDIGS
SARTSDTSVV GDVVGFSILP GSDDVWNSAT QTWDVLPDGP NFAPNMAYIG WGIYVMARAA
EGGDLKRRAA WSAAAHLGGR DLSLWCSAYP SGFQPYRNSH FNIDEWEAAG YDRAFIEDYL
GSEADSYNHP NAAIEPRIPG IFQYYSVAED ELAKIYAGEY GSVQEGADAI AAAWDAITDQ
IGRDSQVALY RSSLGLE
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