| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2098 |
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| Symbol | |
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| ID | 3934551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2107519 |
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| End bp | 2108697 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637904454 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_510040 |
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| Protein GI | 89054589 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.096975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.665186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGC ACCGCCCACC GCATCATTTG CAAAGCGCTG CTATTTTGGT CATCCTCAGG
GATATGGAGT TCCTAAGCGT CAACCACAGC GGCGTCCTGA TCCTAATGTC CTGCATCGTG
GCGCTGGTCG CAGGGTTCAC AGGTCTGTCG CTGACCCGCG ATCTGTCTGA AAAGCCGATG
TTCCAGAAGA AAGCCTCCAT AGCGCTGGCG GCGGTGGCCC TCGGCGGTGG CATCTGGGCC
ATGCATTTCG TTGCCATGCT GGGGCTGAAG CTGCCAATCC TGTTCTACTA TGACGCGGCG
ATCACGCTGG TATCGGCCCT ATCCGCGATC CTGCTGGTTG GCGCGGCCCT GATCCTGTTG
CATTTTGCGG AGCGGACGCC GCTCATCATT TCGCTGGCGG GAGCTATCGT GGGCGTCGGC
ATTCTGGTCA TGCATTATAT TGGCATGGCG GGGCTGGAGC TGTGCAGGGC CGTCTACTCG
ACCGGCGGCG TTGTGTTTTC GTCCATCGTG GCCATCGGCC TGTGCGTCCT TGCGTTCTGG
ATCGCCTATG GACAGCGGAC CAACCGCAAC ATCGTTCTGG GGACGATCTG TTTTGCGATA
GCGGTCTGCT CCGTCCATTT TCTGGCGATT GCGGGGACCA ATTTCGTGCC AGAGCCTACC
CTGGCTGAAT TCGGCCCGTC CATGAGCAAT GAGACCCTCG CGCTGGGGGT GATCTTCTTC
AGCTTCGTCA TTTTCGGGGC TTGCCTCTGG GTGAGCGTCA CCTATCTGGT CGCCCCCGCT
GCCAAGGCCG AAAGCGAGGA TCCCCTGCCC GTGCCTGAGC CGATCTCGGA CCTGCAAATC
CCGTGTGAAA GCGATGGCAG CAAGGTGTTT GTCCGGTCCC GCGACGTGTT GTTTGTGCGC
GCCGATGGGC ACTACACCCA GATCTATACC GAGGATGACC GGCTGTTTTG CGTTTGGCCG
ATCACAGTGG CATCCAAACG GCTGTTGCCC GCAGGCTTCC TCCAGACCCA TCGCAGCTAT
CTGGTCAATC CCGACCGTGT CACCCGGTTC GAGCGGACCA AAGACAAAGG CCGCTGTCTG
TTTGACGGCG ACGATCTGCC GCCCGCCCCG GTGAGCCGGT CCAAACTGAA GGCGATCCAG
GACGCACTTG CACCGCAAGT CGGCGCACTT GGTGCGTGA
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| Protein sequence | MKAHRPPHHL QSAAILVILR DMEFLSVNHS GVLILMSCIV ALVAGFTGLS LTRDLSEKPM
FQKKASIALA AVALGGGIWA MHFVAMLGLK LPILFYYDAA ITLVSALSAI LLVGAALILL
HFAERTPLII SLAGAIVGVG ILVMHYIGMA GLELCRAVYS TGGVVFSSIV AIGLCVLAFW
IAYGQRTNRN IVLGTICFAI AVCSVHFLAI AGTNFVPEPT LAEFGPSMSN ETLALGVIFF
SFVIFGACLW VSVTYLVAPA AKAESEDPLP VPEPISDLQI PCESDGSKVF VRSRDVLFVR
ADGHYTQIYT EDDRLFCVWP ITVASKRLLP AGFLQTHRSY LVNPDRVTRF ERTKDKGRCL
FDGDDLPPAP VSRSKLKAIQ DALAPQVGAL GA
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