| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2070 |
|---|
| Symbol | |
|---|
| ID | 3934523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2079144 |
|---|
| End bp | 2080220 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637904426 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_510012 |
|---|
| Protein GI | 89054561 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.315094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.359428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA CCCTTTTGGC ACAGATCGCC GACTTGCAGT CCCAACTGGA GGCGGCCGCG
TCCCTTCACG CGCGCGATGC GCGGGCCATT CGCGCCGCCA ATGAGCGGCT GCACCTTTTG
GAAGCGATGC TCGACATCGT CCCCGTGGGG GTTGTTCTGG CGGATGCCAA TGGAAAGATC
ACGATGGGCA ACAGCAGCGT GGAGCGGCTT GTGGGCCACC CTGTCCTGCA TTCCGAGGAT
GTGGACTCCT ATACCGAATG GAACGGGTAT CATGCCGACG GACGGCGACT GGAAAGCCAC
GAATACCCCC TGTCGCGTAT CTTGCGCGAT GGCGAGGAGG ACGCCGAAAT CGACCTGAAT
TACACGCGCG GGGATGGCGA CACACTCTGG ATGCGCGTTG TCGGCAAACC GGTGAAAGAC
GCCGACGGCA ATCGCATTGG TGCGGCGGTG GCCCTGATCG ATATCGACGA GCAGCGAAAG
CTGATGGCGC AGCAAGAGAC GCTGATCGCA GAGTTGAACC ACCGCGTGAA AAACGCCTTT
ACCGTCGTGA AGTCCATCGT CAACCAGTCC CTGCGAAAGG GCAGCGTTGA GGCGGGCCTG
AGGCAGACCA TTGATCAACG GCTCAACGCC TATGCCAGCG CGCATTCAAA GCTGACGAGT
TCCGATTGGG AACACGCCGC CATCACCACG ATCGCCCATG ATGTCGTCCT GCCGATTGCA
GACGGCCGGG CTCGGATCGA GGGGCCGGAC GTGACACTTC CGACCCGGCA GGCGCTGGCG
CTGTCGATGG CGTTTTATGA ATTGTCGACG AACGCGTTGA AACACGGCGC CCTGTCCAAC
CTGGATGGCC GCATCCATCT TCACTGGTCC GTGGCAGAAA CGGATGACGG CCAGCAGCTT
TCAATCCGCT GGATCGAGCG TGGGGGACCA ATTGCCGCGG AACCAGATGA GACGGGATTT
GGTTCCTTCA TTATCGACCG CGCCATAGCG ATGGAAACCG ACGGTATCGT TAACCTTGTC
TTCGGGGACG AGGGATTAGA ATGGCATCTG GATATGCCCA TTGAACAGAG AGGATAG
|
|---|
| Protein sequence | MPETLLAQIA DLQSQLEAAA SLHARDARAI RAANERLHLL EAMLDIVPVG VVLADANGKI
TMGNSSVERL VGHPVLHSED VDSYTEWNGY HADGRRLESH EYPLSRILRD GEEDAEIDLN
YTRGDGDTLW MRVVGKPVKD ADGNRIGAAV ALIDIDEQRK LMAQQETLIA ELNHRVKNAF
TVVKSIVNQS LRKGSVEAGL RQTIDQRLNA YASAHSKLTS SDWEHAAITT IAHDVVLPIA
DGRARIEGPD VTLPTRQALA LSMAFYELST NALKHGALSN LDGRIHLHWS VAETDDGQQL
SIRWIERGGP IAAEPDETGF GSFIIDRAIA METDGIVNLV FGDEGLEWHL DMPIEQRG
|
|---|
| |