Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2070 |
Symbol | |
ID | 3934523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2079144 |
End bp | 2080220 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637904426 |
Product | signal transduction histidine kinase |
Protein accession | YP_510012 |
Protein GI | 89054561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.315094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.359428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGA CCCTTTTGGC ACAGATCGCC GACTTGCAGT CCCAACTGGA GGCGGCCGCG TCCCTTCACG CGCGCGATGC GCGGGCCATT CGCGCCGCCA ATGAGCGGCT GCACCTTTTG GAAGCGATGC TCGACATCGT CCCCGTGGGG GTTGTTCTGG CGGATGCCAA TGGAAAGATC ACGATGGGCA ACAGCAGCGT GGAGCGGCTT GTGGGCCACC CTGTCCTGCA TTCCGAGGAT GTGGACTCCT ATACCGAATG GAACGGGTAT CATGCCGACG GACGGCGACT GGAAAGCCAC GAATACCCCC TGTCGCGTAT CTTGCGCGAT GGCGAGGAGG ACGCCGAAAT CGACCTGAAT TACACGCGCG GGGATGGCGA CACACTCTGG ATGCGCGTTG TCGGCAAACC GGTGAAAGAC GCCGACGGCA ATCGCATTGG TGCGGCGGTG GCCCTGATCG ATATCGACGA GCAGCGAAAG CTGATGGCGC AGCAAGAGAC GCTGATCGCA GAGTTGAACC ACCGCGTGAA AAACGCCTTT ACCGTCGTGA AGTCCATCGT CAACCAGTCC CTGCGAAAGG GCAGCGTTGA GGCGGGCCTG AGGCAGACCA TTGATCAACG GCTCAACGCC TATGCCAGCG CGCATTCAAA GCTGACGAGT TCCGATTGGG AACACGCCGC CATCACCACG ATCGCCCATG ATGTCGTCCT GCCGATTGCA GACGGCCGGG CTCGGATCGA GGGGCCGGAC GTGACACTTC CGACCCGGCA GGCGCTGGCG CTGTCGATGG CGTTTTATGA ATTGTCGACG AACGCGTTGA AACACGGCGC CCTGTCCAAC CTGGATGGCC GCATCCATCT TCACTGGTCC GTGGCAGAAA CGGATGACGG CCAGCAGCTT TCAATCCGCT GGATCGAGCG TGGGGGACCA ATTGCCGCGG AACCAGATGA GACGGGATTT GGTTCCTTCA TTATCGACCG CGCCATAGCG ATGGAAACCG ACGGTATCGT TAACCTTGTC TTCGGGGACG AGGGATTAGA ATGGCATCTG GATATGCCCA TTGAACAGAG AGGATAG
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Protein sequence | MPETLLAQIA DLQSQLEAAA SLHARDARAI RAANERLHLL EAMLDIVPVG VVLADANGKI TMGNSSVERL VGHPVLHSED VDSYTEWNGY HADGRRLESH EYPLSRILRD GEEDAEIDLN YTRGDGDTLW MRVVGKPVKD ADGNRIGAAV ALIDIDEQRK LMAQQETLIA ELNHRVKNAF TVVKSIVNQS LRKGSVEAGL RQTIDQRLNA YASAHSKLTS SDWEHAAITT IAHDVVLPIA DGRARIEGPD VTLPTRQALA LSMAFYELST NALKHGALSN LDGRIHLHWS VAETDDGQQL SIRWIERGGP IAAEPDETGF GSFIIDRAIA METDGIVNLV FGDEGLEWHL DMPIEQRG
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