| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2035 |
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| Symbol | |
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| ID | 3934488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2040914 |
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| End bp | 2041969 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904391 |
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| Product | TRAP-type C4-dicarboxylate transport system periplasmic component-like |
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| Protein accession | YP_509977 |
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| Protein GI | 89054526 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.297271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.097204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGAT TTTACGGAGT GATGGCCGCC GCCATCGCGA TCACGCCGAT GCAGGCGGCA
GCGGAGACCT ATGACGTCAC GGTCGTGGCG GGCCACCCGC CGGTATTTCG CTGGGTTCGG
ATGCTGGATG AGGCGTTTTA TCCCGCCGTG AACGAAGCCT TGGCAGAGCA TGGCCATGAG
ATGAACTTCA CCGGCCAATA TGGCGGGACG CTTGCGGGTG TTGGCGAAGA GCTGGAAGCG
ATTGAAGTGG GGCTTGCCGA ACTGGGCACC TGCGAGTCGC TGTTCGACCC GGCAAAACTG
GGGCCCCAGA ACGTCACCTA TTACACGCCC TTCGTCAGCT CGGACGTGCG CCAGGTGGGC
GAATTGATGG ACCGCCTGCA CTCCGAAGAT CCGCGGATGC AGCAGGCATA TCTGGACAAC
GGCAATACCT ATCTTGGTGG GCCGATTGTG ATTGATGATT ACATCCTGAT GACGAATTTC
CCGGTGCAAA GCCTGGCAGA CCTGGACGGG CGGCGCATCG CAGCCCCCGG GGCCGCCACC
AACTGGCTGT CCGGCACGGG CGCGGTTGGC GTCTCGGGCA ACCTGACGAC GTATTACAAC
GAGCTGCAGA CGGGCGTATA TGACGGCGTG ATCGTCTTCG CCTCTGCCGC GTTGCCTAGC
AACTTGGCTG AGGTCGCGCC CTACATTCTG CGCGCAGGCC TTGGCGCGCA ATTCGCCGCT
GGCATCTGCG CGAATACCGA TTGGTATGAG GGGCTTCCCG TTGAAGTGCA GGAAGCGCTG
GTGGCCGGCA CAGAAGTCGC GCGGGACTGG TATCTGGGGG AGTTGGAGGC CGCCGTTGAA
ACCGCCTTCA CCACGATGGA GGCCAACGGC GCGACGATCT TTGATGCCCC GCAGGAGATG
CGCCAGGCCT GGGCCGATGG CATGGAGAAC GCGGCCGCTG TCTGGGCTGC CGAATTGGAT
GGCCGGGGTG AGCCCGGGAC CGAGATCCTG AGCCTCTACA TGGATGCGAT GCGCGACGCG
GGCGCCACGC CCCTACGCGA CTGGGACCGC GAATGA
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| Protein sequence | MRGFYGVMAA AIAITPMQAA AETYDVTVVA GHPPVFRWVR MLDEAFYPAV NEALAEHGHE
MNFTGQYGGT LAGVGEELEA IEVGLAELGT CESLFDPAKL GPQNVTYYTP FVSSDVRQVG
ELMDRLHSED PRMQQAYLDN GNTYLGGPIV IDDYILMTNF PVQSLADLDG RRIAAPGAAT
NWLSGTGAVG VSGNLTTYYN ELQTGVYDGV IVFASAALPS NLAEVAPYIL RAGLGAQFAA
GICANTDWYE GLPVEVQEAL VAGTEVARDW YLGELEAAVE TAFTTMEANG ATIFDAPQEM
RQAWADGMEN AAAVWAAELD GRGEPGTEIL SLYMDAMRDA GATPLRDWDR E
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