| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2021 |
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| Symbol | |
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| ID | 3934474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2024287 |
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| End bp | 2025186 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904377 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509963 |
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| Protein GI | 89054512 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0424738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGGCA AATTGACCCT CGATCAATTG CGCGTGCTCG TGGCTGTCGC CGATACCGGC
AGCTTTACGG CCGCCAGCCA GGCTGTCGGA CGGGCGCAAT CGGCGGTAAG TCAGATGATG
GCCGCGCTGG AAAACGCGCA AGGTGTCCAG CTGTTTGATC GGTCTTCCTA CAGGCCCATG
CTGACCGAGG CTGGACGTGT TCTGGTTGCC CAAGCGCGCA CGACGCTGGC GGGGGCCTCC
CGTTTCGAGG CGATGGCAGA GCATATGCGC AGCGGCGTCG AGGCAGAACT GGCGCTGGCG
ATTGATCCGC TCGTGCCAAG TGCACCTTTC ATGCAAGGAT TGCGTGACCT CAGCGCAAGA
TATCCTGATC TTTCGGTTTC ATTCTCGACA GAAGGGCTTG GTGGATCGCT CCGACGTTTG
CGGGACGGTT CGGCATCGCT TGGGATTTGC ACCTTGCTTC CCACCGTGCC GGATGATGTC
GTTGCCTACC CGCTGCTGCA AACCGCCATG ACCCCGGTGG TTGCGGGCAA TCATCCGCTT
GCCTCACAGG ACGGCCCGTT GCAGCGCGGC GATCTGGAGC CGCATGTCCA GCTTGTTCTA
TCAGATCCCG TTGAACCGAG CGGGCCGAAT TATGGCCTGA CCAGCGCACG TCTCTGGCGG
TTTGCCGATC TCAACCGCAG GCTGGATTTC CTGCTCGGGG GCTTTGGGTG GTGTCGGATG
CCAGAGCACC TTGTTGCAGA CGCGCTGGCC GACGGGCGAT TGGTCGCGCT GGATATCAAA
AATGACAATG CGCCGCAGGA TGGACTTCCG ATTTATGCAG CGCATGCGAG GGATAGAGCA
CTCGGGCCAG CAGGGCGATG GTTTCTCGAT GCGATGCGCG AGTGCATGGC GGCCGCATAA
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| Protein sequence | MIGKLTLDQL RVLVAVADTG SFTAASQAVG RAQSAVSQMM AALENAQGVQ LFDRSSYRPM
LTEAGRVLVA QARTTLAGAS RFEAMAEHMR SGVEAELALA IDPLVPSAPF MQGLRDLSAR
YPDLSVSFST EGLGGSLRRL RDGSASLGIC TLLPTVPDDV VAYPLLQTAM TPVVAGNHPL
ASQDGPLQRG DLEPHVQLVL SDPVEPSGPN YGLTSARLWR FADLNRRLDF LLGGFGWCRM
PEHLVADALA DGRLVALDIK NDNAPQDGLP IYAAHARDRA LGPAGRWFLD AMRECMAAA
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