| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2013 |
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| Symbol | |
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| ID | 3934466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2018857 |
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| End bp | 2020089 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904369 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_509955 |
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| Protein GI | 89054504 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.201055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC AGCGCCTCTT TCTGCAAATC TACCTGACGA TCATCGCAGC GCTTACCTTG
ACGGTCCTGA CCACGTCCTT CGCGTTCTCT CGTCTCGGGC CAGAGGAACG ACCCAGTGCG
ACTGCCATCA CCTTGGCTCA ACGTGCCGTC GCCCAGGCAT TGCCTCCCGC CGGTGCTCCG
GTCAGCCAAC AGGCCTCGGC CCTGGAGCTG GTCCGCGCGG ATTTGAGCAT CGAGTTGGCG
TTGTTTGATG CGCAAGGCGC GCTCATCACT GCACGGCCAA TGCCCGAGAC AAGCGATTGG
ACCGTCGAAG ACCTCAACTG GCACGACGGT CCGGAAAGTC TGCTGACCCT GCCGGATGGC
CGGATGGTCG CGGCCCGCGT CCCTTTTCCC GGCTTGGGCG GCGTTGGTGC GCTCGTGCTT
GTGCTGAGTT CAATCGCACT GGCCGTAGCA GTTGCGTCCT ACCCGCTGGT GCGTCGGTTG
ACGGGACGCC TGGAGGGGCT GAAGGTTGCT GTTGAGCGCA TTGGAGATGG TAATCTGTCG
ACGCGGGCGC ACATCGAGGG GCGCGACGAA ATTGCCGCCT TGGCCCACAG CTTCAATGAT
GCCGCCGACA GGATCGAAGC GTTGGTCGAT GCACATCGTG TTCTTCTCGC CAATGCCTCC
CACGAACTAA GGACCCCTTT GTCGCGCATC CGCCTCGGGT TGGAGATGTT TCGCGAGACG
GGGGAGGCCC ATCGCCTTGC ACATGTGGAA ACCGATATCG GGCAACTCGA TAGCCTGATC
GACGAGATCC TGACCCTAAG CCGCCTGGAC GCTGCACCCA TCGAAATGGA ACCCGACATC
GACCTTTTGG GTCTGGTGGC AGAGGAGTGT GCAGATGCAG ACGTGTCCGT CGCAGGCCAA
CCCGCCCTTA TCCGTGGCAA TCGCGAACTA CTGCGCCGCC TCGTGCGCAA CCTCGTCACG
AACGCCGAGC GTCACGGCGC GCCGCCGATC GAGGTTGAGG TGATGCCGCA CGCGGCGAAG
ACGACGCTAT CGGTGCGCGA TGCAGGCAAA GGCTTTGCGA CTGACGACCG CGAAAAAGTG
TTCGAACGTT TCTACCGGGG TCGTAACAAG CAAAACGTCG AGGGATACGG CTTGGGCCTG
CCGCTTGTGC AGCAGATCGC GCAAGCGCAT GGCGGACGGG TGAACATTTC AGAAAATGAG
GGCAGCGCGA TCACCGTGAC TTTCGCGCAG TAG
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| Protein sequence | MIRQRLFLQI YLTIIAALTL TVLTTSFAFS RLGPEERPSA TAITLAQRAV AQALPPAGAP
VSQQASALEL VRADLSIELA LFDAQGALIT ARPMPETSDW TVEDLNWHDG PESLLTLPDG
RMVAARVPFP GLGGVGALVL VLSSIALAVA VASYPLVRRL TGRLEGLKVA VERIGDGNLS
TRAHIEGRDE IAALAHSFND AADRIEALVD AHRVLLANAS HELRTPLSRI RLGLEMFRET
GEAHRLAHVE TDIGQLDSLI DEILTLSRLD AAPIEMEPDI DLLGLVAEEC ADADVSVAGQ
PALIRGNREL LRRLVRNLVT NAERHGAPPI EVEVMPHAAK TTLSVRDAGK GFATDDREKV
FERFYRGRNK QNVEGYGLGL PLVQQIAQAH GGRVNISENE GSAITVTFAQ
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