Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1922 |
Symbol | |
ID | 3934373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1910024 |
End bp | 1910428 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637904276 |
Product | phenylacetic acid degradation-related protein |
Protein accession | YP_509864 |
Protein GI | 89054413 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCAG CCCAGGCGCA AGACGCGCTG GCCACGCATT TCGCGCCGTG GGTGCAGGAT CTGGGCCTTG TCGTGACGGA GATCGAGGCC ACGCATACGA TGACGCGGAT GCCCCTGACG GCGCCGTTGA TGCGGACCGG CGGGATCGTC TCAGGCCAGG CGTTGACGGC CCAAGCGGAC ACGACGGTGA TCCTCGCGCT GGCCGGATAT GTCGGCGATT TTGTCCCTGC GGGCACGGTG ACGTTGGACA CCCAGTTCTT GCGACCGGGA AGCGGGACGG CGATCCTGTG CCGCGCCGAG ATCATCCGCG CGGGCCGGAC CATGGCGTTT GCCCGGGCGG AATTGACGGC CGAGGAGACA GTCAAGACGG TCGCCCTGGC CACGGCCACG ATGGCGCTTC CGTGA
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Protein sequence | MTPAQAQDAL ATHFAPWVQD LGLVVTEIEA THTMTRMPLT APLMRTGGIV SGQALTAQAD TTVILALAGY VGDFVPAGTV TLDTQFLRPG SGTAILCRAE IIRAGRTMAF ARAELTAEET VKTVALATAT MALP
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