Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1921 |
Symbol | |
ID | 3934372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1909285 |
End bp | 1909971 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637904275 |
Product | hypothetical protein |
Protein accession | YP_509863 |
Protein GI | 89054412 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.642043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGATAA TCCTCCTTAT TCTGTTAACC ATCTGCCTGG CGGCCTGCGG GCGTCCGTTA ACCGAGGCGG AGGCCGCCTA TATGGCCGAG ATCCAAGGCG ACACCTTCGA CGCCTCGCGG GTGCGGATCA CGGAGAACCC CTTTGTTGGC CTGATCACCC AAACCTATGC GACACGACCC CCAACCACTT GCCGAGAAAG AATTTTCCCA CCCCCTGAAG CACCGACAAT CTCGTCTCAG ACCGGCGGCA TTGTCTTCTT CAACACGCTG CATCTGCGCG AAGATTTGGT AATCGATGAT TACACCCAAT TTCCCGACGG AACCCGGGGC CTTGTCGCGG TCATGTTCTT TGCCCACGAG ATGACGCATA TCTGGCAATG GCAGAACCGG GAGCTGACCG GCTACCACCC GTTCCGCGCC TTCGCGGAAC ATGCGAGGAT CGATGACCCT TACCTCTTTT CCAACGACGA TCCGCGGCCA TTTCTGGATT ATGGGTATGA GCAGCAGGCC TCTCTCGTAG AAGAATACGT GTGCTGTCGC GCCCTTGATC CGGGCGGTCA GCGCACCGGA CGATTGGAGG CGCTGATCGG TCAGGTCATG CCGGTCACGC CACTGCGCGA ACGGGTCGAC GACACGCCGA TCTATCTGCC GTGGGAAGGT GCGCCGATCC GTGGTATTTG TTCCTAA
|
Protein sequence | MRIILLILLT ICLAACGRPL TEAEAAYMAE IQGDTFDASR VRITENPFVG LITQTYATRP PTTCRERIFP PPEAPTISSQ TGGIVFFNTL HLREDLVIDD YTQFPDGTRG LVAVMFFAHE MTHIWQWQNR ELTGYHPFRA FAEHARIDDP YLFSNDDPRP FLDYGYEQQA SLVEEYVCCR ALDPGGQRTG RLEALIGQVM PVTPLRERVD DTPIYLPWEG APIRGICS
|
| |