Gene Jann_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1921 
Symbol 
ID3934372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1909285 
End bp1909971 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content59% 
IMG OID637904275 
Producthypothetical protein 
Protein accessionYP_509863 
Protein GI89054412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.642043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAA TCCTCCTTAT TCTGTTAACC ATCTGCCTGG CGGCCTGCGG GCGTCCGTTA 
ACCGAGGCGG AGGCCGCCTA TATGGCCGAG ATCCAAGGCG ACACCTTCGA CGCCTCGCGG
GTGCGGATCA CGGAGAACCC CTTTGTTGGC CTGATCACCC AAACCTATGC GACACGACCC
CCAACCACTT GCCGAGAAAG AATTTTCCCA CCCCCTGAAG CACCGACAAT CTCGTCTCAG
ACCGGCGGCA TTGTCTTCTT CAACACGCTG CATCTGCGCG AAGATTTGGT AATCGATGAT
TACACCCAAT TTCCCGACGG AACCCGGGGC CTTGTCGCGG TCATGTTCTT TGCCCACGAG
ATGACGCATA TCTGGCAATG GCAGAACCGG GAGCTGACCG GCTACCACCC GTTCCGCGCC
TTCGCGGAAC ATGCGAGGAT CGATGACCCT TACCTCTTTT CCAACGACGA TCCGCGGCCA
TTTCTGGATT ATGGGTATGA GCAGCAGGCC TCTCTCGTAG AAGAATACGT GTGCTGTCGC
GCCCTTGATC CGGGCGGTCA GCGCACCGGA CGATTGGAGG CGCTGATCGG TCAGGTCATG
CCGGTCACGC CACTGCGCGA ACGGGTCGAC GACACGCCGA TCTATCTGCC GTGGGAAGGT
GCGCCGATCC GTGGTATTTG TTCCTAA
 
Protein sequence
MRIILLILLT ICLAACGRPL TEAEAAYMAE IQGDTFDASR VRITENPFVG LITQTYATRP 
PTTCRERIFP PPEAPTISSQ TGGIVFFNTL HLREDLVIDD YTQFPDGTRG LVAVMFFAHE
MTHIWQWQNR ELTGYHPFRA FAEHARIDDP YLFSNDDPRP FLDYGYEQQA SLVEEYVCCR
ALDPGGQRTG RLEALIGQVM PVTPLRERVD DTPIYLPWEG APIRGICS