| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1900 |
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| Symbol | |
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| ID | 3934351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1889443 |
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| End bp | 1890339 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637904254 |
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| Product | TRAP-type mannitol/chloroaromatic compound transport system small permease component-like |
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| Protein accession | YP_509842 |
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| Protein GI | 89054391 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.231956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.528488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGACC TGATCCTCTG GGCTCTGACC GAGCTCGTGA TGGCCCCGGT GAATATCGTA
CGCGCGCTGC TCAACGCGGG CTCGTGGCTT GATTGGTCGA ATTTCGAGAA CCTTGCGCGC
TTCATCTACT ATGGCGCGTC CGTGGAACTC TTCTTCGCGC TCTTCTTCAT CTTCGGGACG
ATCACCGTCA TCGGGATGTT CAAGCGCGAG TTCCTCTGGA CCTGCGTCCG CATCCAGGAA
ACCTTCGCCA ATGCCGTCGG GCGGACCGCC GCCTGGGTTG GCCTTCTGAT GGTCCTGCAA
CAGGTGATGA TCGTGTTCCT GCAACGGATC TTCCGCGTTC CCGATATCTC CATGGGCCCG
CTGGGGACCG TATTCACGCA AGACCTGTCG TGGTGGGCGG AAGAGCTGAA GCTCTATAAC
GCCATCGTCG TGACGCTTTG TGTGACCTAT ACCTTCGTGC AGGGTGGGCA CGTTCGCGTG
GACTTGGTCT ATTCCGCCGT GAAATTCCGC ACCAAGAAGG TGCTCGACAT GTTCGGGGCC
GTGTTCTTCA TGCTGCCCGT CGTGACGCTG ACTTACATGT ATGCCTGGTT CTTCATGTGG
CGCCACCTTG TGGTGCCCAA CCCCTCCGCC TCCAGCGAGC TGGACCGCAT GATCATGCAG
GCCCGCGCCA TGCGGTGGAA CGTGGAAACC ATCGGCTTCA GCCCCAACGG TTTCAACGCT
TATTTCCTCT TCAAAGTGCT GATCGTGGCC TATTGCGTGC TGGTGTTCCT GCAAGCGTGG
TCGATGTTCT GGCGCTCGTA TCTGGAATGG AAAGAAGGCG AGGCCAGTGA GGCCAAATAC
CTCGACCGGG ACAAGTTGGG GGATGAGGAC GCCGAAAGGG CCGCCGCCAT CCACTAG
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| Protein sequence | MLDLILWALT ELVMAPVNIV RALLNAGSWL DWSNFENLAR FIYYGASVEL FFALFFIFGT
ITVIGMFKRE FLWTCVRIQE TFANAVGRTA AWVGLLMVLQ QVMIVFLQRI FRVPDISMGP
LGTVFTQDLS WWAEELKLYN AIVVTLCVTY TFVQGGHVRV DLVYSAVKFR TKKVLDMFGA
VFFMLPVVTL TYMYAWFFMW RHLVVPNPSA SSELDRMIMQ ARAMRWNVET IGFSPNGFNA
YFLFKVLIVA YCVLVFLQAW SMFWRSYLEW KEGEASEAKY LDRDKLGDED AERAAAIH
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