Gene Jann_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1848 
Symbol 
ID3934299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1835113 
End bp1835694 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID637904202 
Productcytochrome B561 
Protein accessionYP_509790 
Protein GI89054339 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.739636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0557217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGGCC CAAGCGTGGG CATGACGAAT TCTGCGGCGG GCTACGGTGC GCTGACCAAA 
TGGTTTCACT GGCTGATCGT GATCCTGTTT GCGGCCCAAT ATCTGGGTGG CAACATCATG
GTGGCGATCG GCTTCAACTC CAGCTTCGCG GGGATTGAGA CCAACACCTA CTACAATTGG
CACAAGTCCC TGGGCCTTGT GGCTTTGGTC ATCGCGGTCG CGCGCATCCT CAACCGCCGG
GTGGGAGAGC TGCCGCCCTG GGCGCCGACC TTGTCCACCT TCGAGCAAAA ATTCATCCAC
CGCTTGGAGC AGGTGTTCTA TACCGCGATG CTGGTGATGC CGATCTCCGG CTGGCTTTAC
GTGATGTACG GCCATTACGG CGTGAACCTT TTTGGCCTGT GGGAGATGCC ACGCCCCTTA
CCGCGCAGCG ACACGATGCG GGACGTCTTC AAATGGGTGC ATATCGTGGC GGGCTGGGTG
CTGTTGGCCG CCATGGTGGG CCATATCGGG CTGGTTCTGC GTCACCAGGT GATGATGAAG
GACGGGCTGT TGAAACGGAT GCTGCCAGGG CGGGGGGAGT GA
 
Protein sequence
MGGPSVGMTN SAAGYGALTK WFHWLIVILF AAQYLGGNIM VAIGFNSSFA GIETNTYYNW 
HKSLGLVALV IAVARILNRR VGELPPWAPT LSTFEQKFIH RLEQVFYTAM LVMPISGWLY
VMYGHYGVNL FGLWEMPRPL PRSDTMRDVF KWVHIVAGWV LLAAMVGHIG LVLRHQVMMK
DGLLKRMLPG RGE