Gene Jann_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1847 
Symbol 
ID3934298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1834795 
End bp1835034 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content55% 
IMG OID637904201 
Producthypothetical protein 
Protein accessionYP_509789 
Protein GI89054338 
COG category[S] Function unknown 
COG ID[COG2841] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.301519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.093539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA CGCCCCATGA ACTGGCCGAA GATTTCCCCG AGCATGTCGA CAAAATGCAT 
GAATTGCGCG GCTCGGACGC GCATTTCGCA AAGCTGTTCG ATGCCTATCA TGTGGCCAAC
CGCGCCACCC ATCGCGCAGA AACCGATGTG GAGCCGACAA CGGATGACCA TCTGACGGAA
TTGCGCAAGG AGAGGATGCG GTTGAAAGAT GAGATCTACG GTTATCTGAC GAAAGCCTGA
 
Protein sequence
MSNTPHELAE DFPEHVDKMH ELRGSDAHFA KLFDAYHVAN RATHRAETDV EPTTDDHLTE 
LRKERMRLKD EIYGYLTKA