| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1828 |
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| Symbol | |
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| ID | 3934277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1814584 |
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| End bp | 1815621 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637904180 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_509770 |
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| Protein GI | 89054319 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01747] diaminopropionate ammonia-lyase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.188606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACATC TCACGCCCAC ACCCGCCCAA ATCGCCTCCA TTCACAATGC CCTTGCGGAC
ATTCCGTGGC CCTCTGTCGA CGCGGACGCC CCGCGCGCGC TGCTTGACCG ATGCCCGGTG
GCGGCACAGA CGCCGCTGAT CGCAGCCCGG GACCTGGCGG CGCAGATGGG CGTGGCGACC
CTTCACATCA AGGATGAGCG TGCGCGCATG GGGCTTGGCA GCTTCAAGGC GCTTGGGGCG
GCTTACGTCA TTGCCCGCGA CGGGGCGGCG GGCACGGCCC GGGGGCAGGC GTATTACACG
GCCAGCGCGG GCAATCACGG GTTGTCGGTG GCGGCAGGCG CGCAGGCTTT CGGGGCACGG
GCAGTGATCT ACCTTGCCGC GACGGTGCCG GAGGCGTTTG CCGCGCGGCT GGAAGCCATG
GGGGCCGAGG TCCGTTGGCG CGGCGATGTT TATGAGGACA GTATGGACGC CGCCAAGGCC
GATGCGCAGG CCGAGGGCGC AGTCTTGCTG TCGGACAGCT CCTGGCCCGG ATACACCGAC
CGGCCCTGGC GGTTGATGGA GGGATATCTG GTCTTGATGC AGGAGGCCGC GGCGCAAATG
CCCGACCCGC CGACCCACAT GTTCCTACAG GCGGGCGTCG GGGGGCTGGC CGCCTCTGCC
GCCGCCTATG CGCGTCACAT TTGGGGCCCT GACCCCAGGA TTGTTGTGGT GGAGCCGGAG
GTCGCACCCG CATTGATCGC GTCCATGGCC GCCGGGCGGG CCATCGTCGC GGAAGGGCCT
GCCAGCGCCA TGGGGCGGCT CGATTGCAAG GAGCCGTCGT TGATCGGGCT TAAGGGTCTG
GCCCGTGATG CCTCGGATTT CATGGTGATT TCGGAAGAAG AAGGGGCCAT GGGCGCACAG
ATGGCGGAGG ATGCGGGCCT GCCCTCCACC CCGTCGGGCG CGGCGGGGCT TGCGGGTTTG
GCTGTGGCGG CAAGCGGTGA GTTTGGGCTG GACGCCACGT CGCGCGTAAT GGTCATCCTT
AGCGAGGGAC CCGAATGA
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| Protein sequence | MRHLTPTPAQ IASIHNALAD IPWPSVDADA PRALLDRCPV AAQTPLIAAR DLAAQMGVAT
LHIKDERARM GLGSFKALGA AYVIARDGAA GTARGQAYYT ASAGNHGLSV AAGAQAFGAR
AVIYLAATVP EAFAARLEAM GAEVRWRGDV YEDSMDAAKA DAQAEGAVLL SDSSWPGYTD
RPWRLMEGYL VLMQEAAAQM PDPPTHMFLQ AGVGGLAASA AAYARHIWGP DPRIVVVEPE
VAPALIASMA AGRAIVAEGP ASAMGRLDCK EPSLIGLKGL ARDASDFMVI SEEEGAMGAQ
MAEDAGLPST PSGAAGLAGL AVAASGEFGL DATSRVMVIL SEGPE
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