Gene Jann_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1805 
Symbol 
ID3934254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1794158 
End bp1794616 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content65% 
IMG OID637904157 
Producthypothetical protein 
Protein accessionYP_509747 
Protein GI89054296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.191083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC TCCTATATAT CATCGCCGCC GGCGTCATTG CGACCATCGC ATTGGCCGCC 
TATGTCCGCC TGGCCCCGGT CGATGCCGCG CAGTGGCACG TTGACCCGGA AGAGGTCACG
CCGCCGTCTT CCCCCAACTT CTCGCTCCTG GCGGGCTCTG GAGCCGTCAC GGTGCCCGCG
CCCGCGCTGG CCGTGGCGGG CCGTTTGCAG AATATCGCGG AGGCGGACGG GGCAGAGGTT
GTCGCAGGCT CCCTCGGGGA AGGGTTCGTG ACCTACATCG TGCGCTCCCG CATCATGGGG
TTTCCGGATT TCGTGACGAT CCGATTGGTG CCTGAGGAGG ACACGACGCG GCTGCACATC
TTCTCGCGCT CTCGGCACGG GATGAGCGAT CTGGGCGTGA ACACGGCGCG GGTTCAGCGT
TGGTTGACGG CCGCCCGCAA TGAAGAAAGC GGAACCTGA
 
Protein sequence
MKILLYIIAA GVIATIALAA YVRLAPVDAA QWHVDPEEVT PPSSPNFSLL AGSGAVTVPA 
PALAVAGRLQ NIAEADGAEV VAGSLGEGFV TYIVRSRIMG FPDFVTIRLV PEEDTTRLHI
FSRSRHGMSD LGVNTARVQR WLTAARNEES GT