| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1778 |
|---|
| Symbol | |
|---|
| ID | 3934226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1766245 |
|---|
| End bp | 1767144 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637904129 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_509720 |
|---|
| Protein GI | 89054269 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0099655 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.734329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAGTTT TGGTGCGCGT TTGCGTAGGT TTGGGGATCC TCACCCTCGG CGCGAGCTAT
CTGGGGGCTT TGCACCCTCT GGGCGATTCT CTGGCGGTGT TCAGAAACTG GATCGCGGGC
GCGTTGCTGG CCTTTGCCGT GATCATGATC TTTCTGCGGC CCCGCGCGCT TGGCGTGGCG
GTATCGGTTG GAGCGGGCAT CGCGCTGGTC GGGGCGACGC CCGCTGAAAT AGGGGCCATG
CATTCCAGCG AGTTTGTCCG GCCCCAGACA ATCTACCAGA AAAACCTGCT TTTCGCCCTG
CCGGATGCCA CCGCAATTCT GGACGATATC GCTGAGGTCA GCCCCGATCA CATGACCTTG
CAGGAGGTGA ACGCCAGCAA CCGCGCGCAG GTTCTGGCCG CTTTGCCAAA CTTCTATGCG
CGGCATTTCT GCCCATTTGC CTCCGTCGGT GGGGTCGCGG TGTTGTCGCG GTACGAGGTT
GTGGAGGGCA GTGAATTTTG TATCGAAGGG CGCGGGATGG CCGGGTTTCA GGTGCTGAGC
CCGCAAGGGC CGTTATGGGT CGTGTCGGTG CATCTCCACT GGCCCTATCC TTACAGTCAG
CGGGCGCAGG TGGAGGAATT GACACCGATT GTCGCCGCGC TGGAGGGCCC GGTGCTGATC
GGCGGGGACT TCAACATGGT GCCGTGGTCG TGGGTCATGC GGGAGTTTGA ACGGGCCAGC
GGGTCGCGGG TGCCACATCC GCTGAGTGGC ACGATCCAAT TGTTCGATGG CTGGTTTGCA
CCGCCGATTG ACCACGTGAT CCTCCCGGGG CGGGGCGGCA TCCAATCCGT GCACCCAAGA
TTGGGGTCCG ATCACCGGGC GATTGTGGGG ATGTTCGAGA TCACTGAACC CGGCGTCTAG
|
|---|
| Protein sequence | MRVLVRVCVG LGILTLGASY LGALHPLGDS LAVFRNWIAG ALLAFAVIMI FLRPRALGVA
VSVGAGIALV GATPAEIGAM HSSEFVRPQT IYQKNLLFAL PDATAILDDI AEVSPDHMTL
QEVNASNRAQ VLAALPNFYA RHFCPFASVG GVAVLSRYEV VEGSEFCIEG RGMAGFQVLS
PQGPLWVVSV HLHWPYPYSQ RAQVEELTPI VAALEGPVLI GGDFNMVPWS WVMREFERAS
GSRVPHPLSG TIQLFDGWFA PPIDHVILPG RGGIQSVHPR LGSDHRAIVG MFEITEPGV
|
|---|
| |