Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1733 |
Symbol | |
ID | 3934181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1726402 |
End bp | 1727148 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637904084 |
Product | triosephosphate isomerase |
Protein accession | YP_509675 |
Protein GI | 89054224 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0214124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.405156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGGA AACTGGCGGC AGGCAATTGG AAGATGAACG GGGTAGAGGC CGATTTGGCC GAGGTGGACG CTTTGGGCGA GGCTGTTGCG GCGGCCAATT GCGACGTCTT GCTGTGCCCG CCCGCGACGC TGATTGCGCC GATGGCCAAG CGCGCGGGGT TGATGGACCT CTATGTCGGC GGCCAGACAT GCCATACGGC CGCGTCGGGC GCGCACACTG GCGACGTGTC GGCGGCGATG CTGGCCGACG CGGGCGCGAG CCACGTGATC CTTGGCCATT CGGAACGACG CGCAGACCAT GGCGAGCGCA GCGAAGATGT GGCGGCCCAG GTCACGGCCG CCATTGACGC CAACCTGATC GCGATCATCT GCGTCGGCGA AACCGAAGCC GAGCGTGATG CGAATGTGAC CCTGAACGTC GTCTCCAGCC AGTTGGCAGG CTCCATCCCC ACCGGCGCCA CGCCCGCGCA GATCGTCGTG GCCTATGAGC CCGTCTGGGC CATCGGCACG GGCCGCACGC CGACGCTGGA ACAGATTGCC GAGGTCCATG ATCACATCCG GTCTGAACTG GCCGCGCGCC GGGGCAGCGC CGCCAATGAT ATCCCGCTGC TCTATGGCGG ATCGGTCAAG CCCGGCAATG CCGCAGAGAT CTTTGCGGTG TCCAATGTGG ACGGCGCGCT GGTCGGTGGC GCATCGTTGA AGGCGTCGGA TTTCGGCGGA ATTATCGCCG CCCTGTCCGC CGCCTGA
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Protein sequence | MARKLAAGNW KMNGVEADLA EVDALGEAVA AANCDVLLCP PATLIAPMAK RAGLMDLYVG GQTCHTAASG AHTGDVSAAM LADAGASHVI LGHSERRADH GERSEDVAAQ VTAAIDANLI AIICVGETEA ERDANVTLNV VSSQLAGSIP TGATPAQIVV AYEPVWAIGT GRTPTLEQIA EVHDHIRSEL AARRGSAAND IPLLYGGSVK PGNAAEIFAV SNVDGALVGG ASLKASDFGG IIAALSAA
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