| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1731 |
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| Symbol | |
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| ID | 3934179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1722982 |
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| End bp | 1724847 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904082 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_509673 |
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| Protein GI | 89054222 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.746753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACC GGCCCGCACC CGTTCCTTTG ACCCGTCCCC GCGCGACCCG ATCGCGCCGG
GCGATCTGGG CCGTGGTGCT GGCGGCCCTT CTGGCGCTTG GCGCGATATT GGCCGCTCTG
CCCCGGATCG AGCGCTTTTA CCTCCGCCAG GCCGGGACCG AACATGCGGC CACTCTGGCC
CTTGCCACCC AGGTCCTGCG CGGCGCGCTG GAGCGCACGC AAGCGCTGCC CGCCCTGATC
GCGGACCGCA CGATTTTGCA ACAGCTGCTG GCCGAGCCCG ACAATGACGG CATCGTGCCC
TTCACCAATG AGTTGTTGCG CCAATCCGCC CTGTCGCTTG ATGTCTCCGA TATCTACGTG
CTCGATACCG AGGGGCGCAC CATTGCGTCG TCCAATTATC GCACCGATCA TTCCTTCATC
GGCCAGAGCT TCGCCTACCG CCCCTATTTC CTCGACGCCA TGGATGCGGG GTTGGGTCGG
TTCCACGCCC TTGGCACGAC ATCCGGCCAG CGTGGGTATT TCTTCGCCTC CCCAGTGATC
GAGAACACGC GGATCATCGG CGTTGTCGTC GTCAAGCTGC GCCTTGATGT GTTTGAAGAG
GCCTGGGCCG CATCTGACGC GACGGTGATG GTGACCGATA TCAACAACGT GATTTTCCTG
TCCGACCGCC AGGATTGGCA CTTTCGCACC ACATCCCCCC TGCGCGAGCC GGTGCGGAAC
CTGATCGCGC GCACCCGGCA ATACCCCGTG TCGATGCTGT CGCCCCTTGG CCTCGACGTC
GCCCCCCTTG ACCCTGATCT GGGCCCTGAC CTGGAGCTGG TGGCTGTGGG GGATGAAAGT
TTCGTGCGCC AGACCACCCT GATCGCCGCC CCCGGATGGC GGGTCAGCAT CCTGACGCCC
ACAGGGCCTG CCCTGCAACA GGCCTGGACC GCCGCGCTGT TGCTGGCGCT GGTTGTCGTT
ATGCTCGGCT TTGTGGCGGC CACCATGCTT GGACGGCGCG CGCGGTTGAT CGAGCGGTTG
GCGGCAGAGC AATCGCTGGC CAGCCTGCTG GAGGCCCGCG TGACCGAGCG GACCGGAGAG
TTGAAGGCCG AGGTGGAGGA GCGTCGCGCG ACCGAGGCGC GTTTGCGCAA GACCCAGGCG
GAGCTGGTGC AGGCGGGCAA GCTGGCGGCC CTTGGGCAAA TGTCCGCCGC ACTTAGCCAT
GAGTTCAATC AGCCGCTGGC GGCGGTCAAA TCCTACGCTG AGAATGCGGG CACCTTCCTG
GATCGGGGCC GCATGGATGA GGCGCGCGGC AATATTCAGC GGATCAGCGG TTTGGCCGAC
CGGATGGCCG CAATATCCAA ACACCTGCGC AACTTCGCGC GGCGCCCCGG TGACAAGACC
GGCCCGGTGC CGCTCCGGCC CGTGATCGCA GATGCATTGG AGTTGATGGC CCCGCGCCTG
CGCGACGCGG ATGTGCGCTA TGATCCGCCC CGGGTCGAGG TTTGGGCGCG CGGCGGTCGG
GTGCGCCTGC AACAGGTGGT GGTGAACCTT CTGGGCAATG CGCTGGACGC GATGGCCCAG
GTGGATCCTC CGACAATCGA GATCACGCTG ACGGGCGGCG ACGCCCCGCA GATCGCCGTG
CGCGACATCG GCCCCGGCCT CTCGGACGAG GCGCTGGCCC ATGCCTTCGA TCCCTTTTTC
ACCACCAAGG AGCCGGGACA GGGCCTTGGG CTCGGCCTGT CGATCTCCTA CAATATCATC
GGCGACTTTG GGGGGCGTTT GTCGGCCGAG AACCACGCCG GGGGCGGCGC GATCTTCCGC
GTCACGCTGG AGGCCGCCAC GCCTCAGGCC CCGGGTCTTG AAGCACGGGA GCTGGCCGCC
GAATGA
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| Protein sequence | MRDRPAPVPL TRPRATRSRR AIWAVVLAAL LALGAILAAL PRIERFYLRQ AGTEHAATLA
LATQVLRGAL ERTQALPALI ADRTILQQLL AEPDNDGIVP FTNELLRQSA LSLDVSDIYV
LDTEGRTIAS SNYRTDHSFI GQSFAYRPYF LDAMDAGLGR FHALGTTSGQ RGYFFASPVI
ENTRIIGVVV VKLRLDVFEE AWAASDATVM VTDINNVIFL SDRQDWHFRT TSPLREPVRN
LIARTRQYPV SMLSPLGLDV APLDPDLGPD LELVAVGDES FVRQTTLIAA PGWRVSILTP
TGPALQQAWT AALLLALVVV MLGFVAATML GRRARLIERL AAEQSLASLL EARVTERTGE
LKAEVEERRA TEARLRKTQA ELVQAGKLAA LGQMSAALSH EFNQPLAAVK SYAENAGTFL
DRGRMDEARG NIQRISGLAD RMAAISKHLR NFARRPGDKT GPVPLRPVIA DALELMAPRL
RDADVRYDPP RVEVWARGGR VRLQQVVVNL LGNALDAMAQ VDPPTIEITL TGGDAPQIAV
RDIGPGLSDE ALAHAFDPFF TTKEPGQGLG LGLSISYNII GDFGGRLSAE NHAGGGAIFR
VTLEAATPQA PGLEARELAA E
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