Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1731 |
Symbol | |
ID | 3934179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1722982 |
End bp | 1724847 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637904082 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_509673 |
Protein GI | 89054222 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.746753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGACC GGCCCGCACC CGTTCCTTTG ACCCGTCCCC GCGCGACCCG ATCGCGCCGG GCGATCTGGG CCGTGGTGCT GGCGGCCCTT CTGGCGCTTG GCGCGATATT GGCCGCTCTG CCCCGGATCG AGCGCTTTTA CCTCCGCCAG GCCGGGACCG AACATGCGGC CACTCTGGCC CTTGCCACCC AGGTCCTGCG CGGCGCGCTG GAGCGCACGC AAGCGCTGCC CGCCCTGATC GCGGACCGCA CGATTTTGCA ACAGCTGCTG GCCGAGCCCG ACAATGACGG CATCGTGCCC TTCACCAATG AGTTGTTGCG CCAATCCGCC CTGTCGCTTG ATGTCTCCGA TATCTACGTG CTCGATACCG AGGGGCGCAC CATTGCGTCG TCCAATTATC GCACCGATCA TTCCTTCATC GGCCAGAGCT TCGCCTACCG CCCCTATTTC CTCGACGCCA TGGATGCGGG GTTGGGTCGG TTCCACGCCC TTGGCACGAC ATCCGGCCAG CGTGGGTATT TCTTCGCCTC CCCAGTGATC GAGAACACGC GGATCATCGG CGTTGTCGTC GTCAAGCTGC GCCTTGATGT GTTTGAAGAG GCCTGGGCCG CATCTGACGC GACGGTGATG GTGACCGATA TCAACAACGT GATTTTCCTG TCCGACCGCC AGGATTGGCA CTTTCGCACC ACATCCCCCC TGCGCGAGCC GGTGCGGAAC CTGATCGCGC GCACCCGGCA ATACCCCGTG TCGATGCTGT CGCCCCTTGG CCTCGACGTC GCCCCCCTTG ACCCTGATCT GGGCCCTGAC CTGGAGCTGG TGGCTGTGGG GGATGAAAGT TTCGTGCGCC AGACCACCCT GATCGCCGCC CCCGGATGGC GGGTCAGCAT CCTGACGCCC ACAGGGCCTG CCCTGCAACA GGCCTGGACC GCCGCGCTGT TGCTGGCGCT GGTTGTCGTT ATGCTCGGCT TTGTGGCGGC CACCATGCTT GGACGGCGCG CGCGGTTGAT CGAGCGGTTG GCGGCAGAGC AATCGCTGGC CAGCCTGCTG GAGGCCCGCG TGACCGAGCG GACCGGAGAG TTGAAGGCCG AGGTGGAGGA GCGTCGCGCG ACCGAGGCGC GTTTGCGCAA GACCCAGGCG GAGCTGGTGC AGGCGGGCAA GCTGGCGGCC CTTGGGCAAA TGTCCGCCGC ACTTAGCCAT GAGTTCAATC AGCCGCTGGC GGCGGTCAAA TCCTACGCTG AGAATGCGGG CACCTTCCTG GATCGGGGCC GCATGGATGA GGCGCGCGGC AATATTCAGC GGATCAGCGG TTTGGCCGAC CGGATGGCCG CAATATCCAA ACACCTGCGC AACTTCGCGC GGCGCCCCGG TGACAAGACC GGCCCGGTGC CGCTCCGGCC CGTGATCGCA GATGCATTGG AGTTGATGGC CCCGCGCCTG CGCGACGCGG ATGTGCGCTA TGATCCGCCC CGGGTCGAGG TTTGGGCGCG CGGCGGTCGG GTGCGCCTGC AACAGGTGGT GGTGAACCTT CTGGGCAATG CGCTGGACGC GATGGCCCAG GTGGATCCTC CGACAATCGA GATCACGCTG ACGGGCGGCG ACGCCCCGCA GATCGCCGTG CGCGACATCG GCCCCGGCCT CTCGGACGAG GCGCTGGCCC ATGCCTTCGA TCCCTTTTTC ACCACCAAGG AGCCGGGACA GGGCCTTGGG CTCGGCCTGT CGATCTCCTA CAATATCATC GGCGACTTTG GGGGGCGTTT GTCGGCCGAG AACCACGCCG GGGGCGGCGC GATCTTCCGC GTCACGCTGG AGGCCGCCAC GCCTCAGGCC CCGGGTCTTG AAGCACGGGA GCTGGCCGCC GAATGA
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Protein sequence | MRDRPAPVPL TRPRATRSRR AIWAVVLAAL LALGAILAAL PRIERFYLRQ AGTEHAATLA LATQVLRGAL ERTQALPALI ADRTILQQLL AEPDNDGIVP FTNELLRQSA LSLDVSDIYV LDTEGRTIAS SNYRTDHSFI GQSFAYRPYF LDAMDAGLGR FHALGTTSGQ RGYFFASPVI ENTRIIGVVV VKLRLDVFEE AWAASDATVM VTDINNVIFL SDRQDWHFRT TSPLREPVRN LIARTRQYPV SMLSPLGLDV APLDPDLGPD LELVAVGDES FVRQTTLIAA PGWRVSILTP TGPALQQAWT AALLLALVVV MLGFVAATML GRRARLIERL AAEQSLASLL EARVTERTGE LKAEVEERRA TEARLRKTQA ELVQAGKLAA LGQMSAALSH EFNQPLAAVK SYAENAGTFL DRGRMDEARG NIQRISGLAD RMAAISKHLR NFARRPGDKT GPVPLRPVIA DALELMAPRL RDADVRYDPP RVEVWARGGR VRLQQVVVNL LGNALDAMAQ VDPPTIEITL TGGDAPQIAV RDIGPGLSDE ALAHAFDPFF TTKEPGQGLG LGLSISYNII GDFGGRLSAE NHAGGGAIFR VTLEAATPQA PGLEARELAA E
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