| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1722 |
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| Symbol | |
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| ID | 3934170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1710018 |
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| End bp | 1711136 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904073 |
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| Product | major facilitator transporter |
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| Protein accession | YP_509664 |
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| Protein GI | 89054213 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.36396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.2591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC TCTCTCCCCC CCGGCGTACC CCGTGGCTGC TGATCGCGGC GCTTTACCTG
ACCGGGTTGA TCGCGGGTAT GCAGTTCACC AAGATTTCCC TGACCCTGAC GGGTCTTGCG
GGCGTCTATC CGGGCTGGCC CGTGGCCTTT GCCGTCTCGG GCGTGGCGGT CATTGGGATC
ATCTTCGGCG TTATGGCGGG CGGCATCACG GCCAGTGTCG GCCCCCGCCG CGCGATCCTC
TGGGCCCTTG GCGCTTCGGC GATCGTGGGC GGGCTGGAGG CGCTGTTGCC CCCGTTTCCC
GTCTTCATGG CGCTGCGTGT GGTCGAAGGG GCCGGGCATC TGGTCCTTGT CGTGGCCGTG
CCGACGCTGA TGGCGCGGCT GGCGGCGCCC AAAGACAGCG CCATGGTTAT GGGCCTTTGG
GCGACGTTCT TTGGGGTGGG CTTCGCGACG GCGGCGCTTT TGATGGGCGA CAACCTGCGC
GCGGCCTATG GTGGCCACGC GGCATTCGCG GCTGTGATGC TGGCCGTCCT CTGGGCGATG
CTGCCACGCG GCGTCGCCGT GGCGCGTCGC CCTTTACCGC GCCTGTCAGA TCACCTGATG
ATCTATTCCA CCCCGCGCCT GTTCGCGCCG GGGCTGGGCC ATGGCATCTA TGCGATGCTG
TTTCTGGCCC TGATCACCTT CCTACCCGTG GCGCTGGACG CGCTGTGGCT TGCGCCGATC
CTGCCGTTGG CCGGGATTGC CGGGTCGTTT CTGGCCGGGG TCCTTGCGCG GTGGATCGCG
CCTGGCACGC TGGTCTGGAC AACATTCGTG GCCATGGCGG TGCTGTTTGC GGTCACGATG
GTCGCCGGGA CCGCCGCGCC CTATATCCTG ATCTTCACCA TGGGCTTCAG CGGCATCGTT
GCGGGGGCAG GCTTCGCGGC TGTCCCATGG CTTAATCCGG CCGACGAGGA CCGCGCGCTC
AGCAACGGGG CTTTGGCGCA ATTGGGCAAT ATCGGCACGT TCACCGGCAC GCCGGTTCTG
GCCGCCCTTG GGCCCGGCGC CTACTTCCCC ACGGCGATCC TTGTCTGCAT CGTGGCAGCA
GCCGTCACCG GATTGGCCTA TCGCGCCGCA CGTTCCTGA
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| Protein sequence | MSTLSPPRRT PWLLIAALYL TGLIAGMQFT KISLTLTGLA GVYPGWPVAF AVSGVAVIGI
IFGVMAGGIT ASVGPRRAIL WALGASAIVG GLEALLPPFP VFMALRVVEG AGHLVLVVAV
PTLMARLAAP KDSAMVMGLW ATFFGVGFAT AALLMGDNLR AAYGGHAAFA AVMLAVLWAM
LPRGVAVARR PLPRLSDHLM IYSTPRLFAP GLGHGIYAML FLALITFLPV ALDALWLAPI
LPLAGIAGSF LAGVLARWIA PGTLVWTTFV AMAVLFAVTM VAGTAAPYIL IFTMGFSGIV
AGAGFAAVPW LNPADEDRAL SNGALAQLGN IGTFTGTPVL AALGPGAYFP TAILVCIVAA
AVTGLAYRAA RS
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