| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1703 |
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| Symbol | |
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| ID | 3934151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1686317 |
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| End bp | 1687048 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637904054 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509645 |
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| Protein GI | 89054194 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00213351 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACTTGC ACGTGCAAGG CGGCATCAGG CGGCGACATC GAATTGAGGC GGCGACTGAC
ATGCATTCCG ACATCGACCT TTCCAGTAAG ATCGCGCTGG TCACCGGCGC GTCCCGTGGC
CTTGGGGCCG CGTCCGCCCT GTGGCTGGCC GAACGCGGGG CCCATGTGGT GGCCGTGGCG
CGCACCATCG GCGGGCTGGA GGATCTGGAC GACCGGATCA AGGCGGCAGG CGGGCAAGCC
ACGCTCGCGC CGATGGATCT GACGGATGAT GGCGCGGTCG CGCATCTGTG CCGGTCCCTG
CATGATCGCT GGGGTCGCGC CGATATCTGG GTCCACACGG CGATCCATGT CAGCGCCCTG
ACCCCGGCCC CCCATGTGCA GGCCAAGGAC CTCGACAAGG TCATTGCGAC GAACATACGC
GGCGTCTCGC GCCTGATCGC CAACACCGAG CCGCTGATCG CGCCGTCCGA GGCCCCTACC
GCCGTGTTCT TCGACGACGA TTGGGATGCG AAATTCGCAG GCCCCTACGC GATGTCCAAG
GCCGCGCAGC GGGCGCTGGT GCAAAGCTGG CAGGCCGAGA CGGCCAAGGC CCCGATGGCG
GTGCATCTTT TGCGCCCGAA GCCGATGCCC ACGGCGGTCC GTGCGCGGTT CTACCCCGGC
GAAGACCGCA CGCCCCTGGC CGATCCCGCG TCCGAGGCCG ATCGCCTTCT GTCGTCTGTC
TTCAATGGCT AG
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| Protein sequence | MHLHVQGGIR RRHRIEAATD MHSDIDLSSK IALVTGASRG LGAASALWLA ERGAHVVAVA
RTIGGLEDLD DRIKAAGGQA TLAPMDLTDD GAVAHLCRSL HDRWGRADIW VHTAIHVSAL
TPAPHVQAKD LDKVIATNIR GVSRLIANTE PLIAPSEAPT AVFFDDDWDA KFAGPYAMSK
AAQRALVQSW QAETAKAPMA VHLLRPKPMP TAVRARFYPG EDRTPLADPA SEADRLLSSV
FNG
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