Gene Jann_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1675 
Symbol 
ID3934123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1659122 
End bp1660012 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID637904026 
Producthypothetical protein 
Protein accessionYP_509617 
Protein GI89054166 
COG category[S] Function unknown 
COG ID[COG4254] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.642671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCA AGACATTCAA GATCGCCGCA GTGGCGGCCC TCGCCCTTGC GGCCCCGTTT 
GCAGCCCCGG TCGCCGCGCA AAACATCGGG ACCGTTGCCT CGACCGAGCC GACGCTGCGC
GGCACGCCGC CCGGCGCGGG CACACGTCCC CTGACCCTCG GCACCGGCGT CGTCCAGAAC
GAGACGGTGG CCGCATCCGC CTCGGGCCGT GGTCAGATCC TGTTTATCGA CCAGTCGACC
CTGTCGCTAG CCCCGAACAC CACGATTGTG CTCGACCAGT TCGTCTTCAA CCCCAATGGC
TCCGGCCAGA TGGGTCTGTC GATGACCGAA GGCGCGCTGC GCTTCATCGG CGGCACGCTG
TCGCGCGGGC AAGAGGCGAC GGTCACGACG CCCACAGCCA CCATCGGCAT CCGTGGGTCC
AGCGCGCTGA TCGTTCACCT GAACGGACAA ACGGTCGCTG TTTTTCTGGC TGGAGAGCGG
TTGTGCCTCT ACACGGCCGG CGGACAGCGC GCCTGCACCA GCCGACGCGG CGGTGTTCTG
ACGGTCGAAG GCTATCAGGG CCGCGTGAAC CCTGATTATC TGGCGCAGAT CCTGTCCCTG
ATTGACGGCG CGCCACAGGG CGGCAGTGGC TCGGGTCTTG GGTCAGGGGT CGGCGGGCCC
AACCCTTCGG ATCGCGGTCC GGTCTCCACC GGCGGTGAGG AATTCGATCC AGAAATCTTC
GACGATGACT TCCGCGAAGA TGATCTGTTC CTTGGCCTGC CCGAGCAACA GATGGAGATG
GAAGAGGTGA TATTGGACGA TGCAGTTATG GATCCTATGC CGACGACGCC GACCAATTGC
GACCCCCAGG ACCCGGCGCC GGGGTGTTTC GGAACGCCGA CTTTCCCGTA A
 
Protein sequence
MPFKTFKIAA VAALALAAPF AAPVAAQNIG TVASTEPTLR GTPPGAGTRP LTLGTGVVQN 
ETVAASASGR GQILFIDQST LSLAPNTTIV LDQFVFNPNG SGQMGLSMTE GALRFIGGTL
SRGQEATVTT PTATIGIRGS SALIVHLNGQ TVAVFLAGER LCLYTAGGQR ACTSRRGGVL
TVEGYQGRVN PDYLAQILSL IDGAPQGGSG SGLGSGVGGP NPSDRGPVST GGEEFDPEIF
DDDFREDDLF LGLPEQQMEM EEVILDDAVM DPMPTTPTNC DPQDPAPGCF GTPTFP