| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1673 |
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| Symbol | |
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| ID | 3934121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1656030 |
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| End bp | 1656728 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904024 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_509615 |
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| Protein GI | 89054164 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAA CGATCTGGTC GGCCTCGGGT CTCATCGGGG TTGCCCTTTA CCTTTCGGCC
TATGGCGGGT TGCAGTTTGG CCTGTTGCGC GGCAGCTCGG CTACCTACAC GATCATGAAC
ATGCTCGCTG CGATGGCGGT GCTGGTCAGC ATTGTGGAGG CGTTCAACCT GTCGTCGATG
CTGATTCAGA TCTCCTGGAT CACCCTATCC GTGATCGGCC TGGCGCGTAT GGCCTGGACC
CGGGCAAAGG TGCGCTTTTC CGAGGAGGAG ACATCCTTTC TCGCCGCCCA TTTCAGTACG
CTGTCGCCCC ATCTGGCCCG CAAGTTCCTG CAGCTGGGAA CCTGGCAGAC CGTCAGCCCC
GGTACGATCC TCGCCCGCCA GGGCACACCC GTGCACGAGT TGGTCTATGT CGGACAGGGC
AACGCCGAGG TTCACGCGCA CGGGGCGACC GTGGCCACAA TCGGCCCGAC CGCGTTGATC
GGAGAGATGA CGATCATGCA TGGCGGCGAG GCCACCGCCG ATGTTGAGAT CACGTCAGAG
GCGCGCATTT TTACCCTGCC CCGCGCCGCC CTGATGCGAG AGTTGGAGAT GGACCACGAT
TTCGCGCTGG CCGTCTCGAA CGCCCTGCAA ATCGAAGCGC AGCGCAAAAT CGAGGCGGCA
AACCGGGAAC GCGCCGGGAT GGCGGTCGAG ATAGGTTAA
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| Protein sequence | MELTIWSASG LIGVALYLSA YGGLQFGLLR GSSATYTIMN MLAAMAVLVS IVEAFNLSSM
LIQISWITLS VIGLARMAWT RAKVRFSEEE TSFLAAHFST LSPHLARKFL QLGTWQTVSP
GTILARQGTP VHELVYVGQG NAEVHAHGAT VATIGPTALI GEMTIMHGGE ATADVEITSE
ARIFTLPRAA LMRELEMDHD FALAVSNALQ IEAQRKIEAA NRERAGMAVE IG
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