| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1622 |
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| Symbol | rpsF |
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| ID | 3934070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1609842 |
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| End bp | 1610195 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903973 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_509564 |
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| Protein GI | 89054113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0541746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCTCT ACGAGCACGT GATGATTGCG CGTCAGGACC TGTCCAACGC GCAGGCCGAA
GCGCTGAACG AGCACTTTGG CGCCGTCCTC GCCGACAATG GCGGCACGGT TGTCGACACC
GAATATTGGG GTGTCAAGAC AATGGCCTAC AAGATCAACA AGAACCGCAA GGGTCACTAT
TCCTACCTCC GCACCGATGC GCCATCTGAC GCCGTGCAGG AAATGGAACG CCTGATGCGC
CTGCATGATG ACGTGATGCG CGTCCTGACT ATCAAGGTCG ACGCCCATGA CGAGGGCCCG
TCGGTCCAGA TGCAAAAGCG TGATGAGCGT GAAGGTCGCC GCGAGCGCCG CTAA
|
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| Protein sequence | MALYEHVMIA RQDLSNAQAE ALNEHFGAVL ADNGGTVVDT EYWGVKTMAY KINKNRKGHY
SYLRTDAPSD AVQEMERLMR LHDDVMRVLT IKVDAHDEGP SVQMQKRDER EGRRERR
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