| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1595 |
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| Symbol | |
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| ID | 3934043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1577340 |
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| End bp | 1578185 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903946 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509537 |
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| Protein GI | 89054086 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.352603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.949342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATTG ACCAGATCGA AACCTTCCTC GACCTTCTGG AGACCCAAAG CTTCAACCGC
ACCGCGGACC GGCTGGACGT GACTCAATCC ACCGTGTCGG GCCGGGTCAA GGCGCTGGAA
AAGGCCCTGG GCGAGCGGTT GTTTGAACGC TCCCGCTCCG GCACCCAGCC CACCACGGCG
GCGCTTCGGT TTGAAACCCA TGCCCGCGTG TTGCGCCGAG CCTGGGCCGA TGGGCAGGCC
GATGTGAAGC CCTTTGGCAC CGCCGTCATG CTGCGCATTG GAATACAGCA TGATCTGATC
GACAATCACG TGGCCGATTG GCTGGCGGCC CTCAGGCAAG CCCTGCCCGA ATGCGGCTTC
TATGTGGACG GCGATTATTC CACCCAGATG TGCCGGGATC TGGAGACCGG CGCGCTGGAT
CTGGGCGTGG TGTTCACCCC CCGCCCGTCG CCGGATCTCT ACTTTGAAAG TATGGGAGAG
GTCACCTACC AGATGGTATC CACCGCCCAG ACCAGCCTGC CCCAGATCGA TCCCACCAAC
TACATCCTGC CCAACTACGC GCCCGCCTTC GCCCAAACCC ACGCGGCCCT GCTGCCGGGG
CTGAGCCTTG GGTCCGTGTC CAGCGGACAG GCCGCGGCGG TGCGGGGCCT GCTGATCGCC
CTTGGCGGCA CAACCTATCT GCCAACCGAA ATGGTCAGCG CCCTGATCAC AGAGGGCATC
GCTCACCACG TCCCCGGCGC GCCCGACATC ACCCAGCCCG TCTTTGTGGC GATGCATCTG
CGCAACCGCC ACCGCGCAGG CTACCGACGC ATGGCAAATG TGCTGCGGGA CCGGGTCGGA
ACGTAG
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| Protein sequence | MQIDQIETFL DLLETQSFNR TADRLDVTQS TVSGRVKALE KALGERLFER SRSGTQPTTA
ALRFETHARV LRRAWADGQA DVKPFGTAVM LRIGIQHDLI DNHVADWLAA LRQALPECGF
YVDGDYSTQM CRDLETGALD LGVVFTPRPS PDLYFESMGE VTYQMVSTAQ TSLPQIDPTN
YILPNYAPAF AQTHAALLPG LSLGSVSSGQ AAAVRGLLIA LGGTTYLPTE MVSALITEGI
AHHVPGAPDI TQPVFVAMHL RNRHRAGYRR MANVLRDRVG T
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