| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1530 |
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| Symbol | |
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| ID | 3933978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1499964 |
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| End bp | 1500908 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903881 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_509472 |
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| Protein GI | 89054021 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0391409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.275704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGATA TGAACATTCC CTACCTGTCG CAGGACGATT TGATCGGGCT GGGGCTGAGC
ACGACACAGA TCATCGACAG CATCGACGAC GCCATTCGCG GCAGCGTGAC CGGCACGGTC
TGGTCCGCGC CCAAGGCGGT CATCACGCCC CCCGATGACC CGCGCTACAT GATGGCGGCC
CTTGCGGCGA TGGATAACCC GTCGCTGCTG GCAGTCAAAA CTGTTGTCCT GAACCCCGAA
AATACGGCTA ACGGATTGCC GCAGATCAAC GGCCTCGTGA CCATGCTCGA CAGTGTCACC
GGACTGCCTG TGGCCGTGCT GGACGGCAAT TGGATCACCG AGGTGCGCAC CGCAGGCCTC
AGCGCGCTTG CCGCGAAATA TATGGCCGAT CCGGGTGCCA AAACCATCGG CTTTGTGGGC
TGTGGCGCGC AGGCACGAAG CCACCTTGAT GCCTTCGCGG ACCTCTTTGA TCTGGAGCAT
ATGGTCTATT TCGGGCGGGG TCAGGCCAAT CAGGATCGTC TCGCCGCACT GGCCCACGCG
CGCGGGCTGA CCACGGCGGC CTGTGCCTCG GGGCAAGAGG TTGTGCAGTC GTGCGACCTG
CTGGTGACGA CTGTCACGCA CACGGGAGGT GCGGCTCCGT TCCTTGATGC TTCTGGCATG
AAAGCGGGAT CCTTTGCGGC GGTCGTGGAT CTGGCCGCCC CATGGAAGCG CGACACTTTC
GGGGCGCTGG ACTGCGTGGC AATTGATGAT CTCACACAAG AGGCGGCGCT GCCCAACAAG
CTGTGCGATC CGGCCCTGAT CCACGGTGAC CTGACGGGTT TGGTCACCGG GCAATTACAG
GGGCGCAAGG GCCAAAGTGA TCGAACGGCC TTCGTCTTTC GAGGGCACGC CCTCGGCGAC
TTGGCGTTGT CCGCGCTGGC CATCGAAACG TATCGAACGC TCTAA
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| Protein sequence | MADMNIPYLS QDDLIGLGLS TTQIIDSIDD AIRGSVTGTV WSAPKAVITP PDDPRYMMAA
LAAMDNPSLL AVKTVVLNPE NTANGLPQIN GLVTMLDSVT GLPVAVLDGN WITEVRTAGL
SALAAKYMAD PGAKTIGFVG CGAQARSHLD AFADLFDLEH MVYFGRGQAN QDRLAALAHA
RGLTTAACAS GQEVVQSCDL LVTTVTHTGG AAPFLDASGM KAGSFAAVVD LAAPWKRDTF
GALDCVAIDD LTQEAALPNK LCDPALIHGD LTGLVTGQLQ GRKGQSDRTA FVFRGHALGD
LALSALAIET YRTL
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