| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1524 |
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| Symbol | |
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| ID | 3933972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1493826 |
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| End bp | 1494734 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903875 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509466 |
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| Protein GI | 89054015 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0551916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGGA CCGATCTTGA TGGCATTCTA CCGCTATTGG CGGTGGTCGA GCATGGGAGC
TTCCGGGCGG GCGCTGCGGC ACTCGGGGTC ACACCTTCCG CGATCAGCCA ATCTGTGAAG
CAATTGGAAG AGCGGATTGG CGTCCCGCTT CTGACACGCA CGACCCGCAG CGTTGGCTTG
ACCCAGGCCG GGCAGCTCTT TGTCGACCGT GCCAGTCCAG CGATCTGCGA AGTCCGGGAT
GCCCTTGCTT CGATCTCCGA GTTTGGGCAG CGTCCGTCCG GCCTTTTGCG GATCAGCGCA
CCGCGCTTGG CCTATCCTGT CGCGCTAGCA CCGGTGCTGC CCGAGTTCAT GAAGACCTAT
CCTGAAATCG AGGTTGAGAT TTCGCTGGAG GATACGCTCA CCGACATCGT GCAAAGCCGG
TTCGATGCCG GCATCAGACT AGGCGCAACG GTGGAGGCGG ATATGGTTGC GCGCGCGCTC
ACGCCGCCCT CCAGAATGTG TGTGGTCGCG TCACCCGACT ACCTTGACGC GCACGGCGTG
CCGGAGACAC CGGATGATCT ACTGTCCCAT CGCTGTATCA ACTTTCGTAG GCCGACGCGG
AAAACTGTCT ATCACTGGCG TTTTTTGGAA AGGGGCGAGG ATCGGCATAT CCCGGTTCCC
GGCGTGATGA TTGTCAATGA TACGGCCGCG AAGATTGACG CGGCTCTAAA TGGCTTTGGA
CTTGCCTACG AACTCGCGCC AGTCGTCGAG CAGCATGTGA AAGCCGGTCG GCTTATCTCG
GTACTGGAGG GTTATCTGCC CGAGGTGCCC GGGTTTCACA TATACTACCC GGGACGCAAA
CAGATCATGT TGAAACTGCG CGTGTTCATT GATTTCGCAG CTGCTGAGCT CCGAAGCAGC
AGAGTGTAA
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| Protein sequence | MKRTDLDGIL PLLAVVEHGS FRAGAAALGV TPSAISQSVK QLEERIGVPL LTRTTRSVGL
TQAGQLFVDR ASPAICEVRD ALASISEFGQ RPSGLLRISA PRLAYPVALA PVLPEFMKTY
PEIEVEISLE DTLTDIVQSR FDAGIRLGAT VEADMVARAL TPPSRMCVVA SPDYLDAHGV
PETPDDLLSH RCINFRRPTR KTVYHWRFLE RGEDRHIPVP GVMIVNDTAA KIDAALNGFG
LAYELAPVVE QHVKAGRLIS VLEGYLPEVP GFHIYYPGRK QIMLKLRVFI DFAAAELRSS
RV
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