| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1518 |
|---|
| Symbol | |
|---|
| ID | 3933965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1488471 |
|---|
| End bp | 1489079 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903868 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509460 |
|---|
| Protein GI | 89054009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.785989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.167707 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACT CCACACGGAT CGGCCAAGAA AACACTCGCC CCGCAGGCGT GGATATCGTA
CCCTCACCTG CACAAACACG AGGCAACAAA TGCCCGAACG CGCGAGCAGG TATCTCGATG
ACATCACCCT CCCCGCGGCC AATGGCCAAC GCGGGCGTTA ATGCGCATGG CTGTGAGGCT
GGCCTTGACC CCGGAACGAC CGTTCTGACC ATGGACGGGG CGATCCCCGT TGAGTTCCTG
AGCACCGGCG ATCGCCTCAT CACCCGTCGC GGGGTCCGCA AGATCAAGGC GATCCTGCGC
CACCATGTGC CGGAGGGTAC GCCGCGCGTG GTGATCTCAG CCGATGCGTT GGGCGGCAAG
CCTGCTACGG ACATCACGCT AATGCCCGGC CAGCGCGTTC TGATCCGCGA TTGGCGCGCT
CAGGCCCTTT GGGGCAAGGA TATTGCGGCC CCCCAGGCCG CGCGTCTGGT GGACGGTGAA
TTTATCCGGA CGGAGACGAC GGGCGCTCAG GTCATGCTGT CGCTCTACTT TGGTGCCCCT
GAAATCATCT ACGCGGATGG GCTGGAACTG ACCTCTGCCG ACCTACCAAG TGTGGCCGTC
AAGGCCTGA
|
|---|
| Protein sequence | MTDSTRIGQE NTRPAGVDIV PSPAQTRGNK CPNARAGISM TSPSPRPMAN AGVNAHGCEA
GLDPGTTVLT MDGAIPVEFL STGDRLITRR GVRKIKAILR HHVPEGTPRV VISADALGGK
PATDITLMPG QRVLIRDWRA QALWGKDIAA PQAARLVDGE FIRTETTGAQ VMLSLYFGAP
EIIYADGLEL TSADLPSVAV KA
|
|---|
| |