| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1488 |
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| Symbol | |
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| ID | 3933935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1457551 |
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| End bp | 1458933 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903838 |
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| Product | dihydropyrimidinase |
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| Protein accession | YP_509430 |
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| Protein GI | 89053979 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type
[TIGR02033] D-hydantoinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.366627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAACA CGACAGTCAT TCGTAATACG AAAGTCCTAG GCGGCGCGAC GCTGACCGCC
ATGGACATCG CAATTTCGGA TGGGACAATC CAAGCGATCG GACCGAACCT CCCCGACGCG
GGTCAGAGTA TTGACGCCAG CGGTCTTGTT GCGACGCCAG GCGGTGTCGA TCCCCACGCC
CATATCGAGC AACGCTCGGG CATGGGGTTG ATGAATGCCG ACACGTTTGA AACTGCAACA
CGCTCTGCCG CGTTAGGAGG CACTACCAGC GTCATTTCTT TCGCAGCACA GGGGAAAGGG
CAGCGTTTGC AAGACGTTGT GGGTGACTAT ACCGCCCGCG CGAAACGTGG AGCAATGATC
GACTACGCGT TTCACCTGAG CTTATCGGAC CCTGACGTGC CGCATTTTGT TGACGATTTG
CGCGCCCTCA TTGCTGGAGG GCACAGATCT TTGAAGGTTT TCACGACCTA CGACATTGCG
CTGAACGACG ACCAGATCGA GAAGATCCTA CAAGTGGCTG GCCCGGCCGG CGCATTGACA
TGTGTTCACG CGGAAGACGA TACGACTTTA AGATCTGCTC GCAACATTTT GCTATCCCGT
CATAAATCTC TTCCCAAGCA TCACGCACAG GCGCGTCCTG AGGCCGCCGA ACGCATAGCC
GTGGCCCGGA TCTGTGCGAT GGCCGAGCGC ACGGACGCGC CGGTCATGAT TTTCCATGTC
TCCTGCGCGA GCGCCGCGAA AGCCGTCGCC GATGCCCGAG CGCGGGGCGC CCCGGTTTTT
GCTGAAACCT GCCCCCATTA CTTGTTCATG ACGGCTGACA TTCTTGACAA ACCGGGTGTC
GAGGGCGCGA AGTGGATGTG CTCTCCGCCG CAACGTACGG AAAGGGATCA AGCCGCGCTT
TGGGCCGCTT TGAATGATGG GACACTCGAT CTGATTTCAT CCGATCACGC CCCGTACCGT
TTTGATAAGA CTGGAAAACT AAAGAATGGC TTGAGCCCAC CATTTCCAGA TATCGCGAAC
GGTCTTCCCG GGTTAGAGAC CCGGCTGCCC CTGCTGTTTG ACGCGATCGT GAAACGCTCC
AAGCTTCCAT CGGCCGCATT TGCAGCCCTT ACTGCGGGCG CTGCCGCGGA TATTTATGGT
CTTCCCGGCA AGGGCCGCCT CCGACCCGGC GCGGACGCGG ATATTGTGCT GTGGGATCCC
GAGAAGTCTT ATACGTACGG CGCGGACGAC CTGCATGACA ACGTGGGCTA TAATCCCTAT
GAAGGTCATT GTGTAACTGG TTGGCCAGTA AATGTTTTCT TGCGCGGGCA GCGGATCGTG
AGAGACGGAG CGCTCACTGC CCACCCTGGC CAAGGCCGCT GGATTGATCG GAGACCCACA
TGA
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| Protein sequence | MFNTTVIRNT KVLGGATLTA MDIAISDGTI QAIGPNLPDA GQSIDASGLV ATPGGVDPHA
HIEQRSGMGL MNADTFETAT RSAALGGTTS VISFAAQGKG QRLQDVVGDY TARAKRGAMI
DYAFHLSLSD PDVPHFVDDL RALIAGGHRS LKVFTTYDIA LNDDQIEKIL QVAGPAGALT
CVHAEDDTTL RSARNILLSR HKSLPKHHAQ ARPEAAERIA VARICAMAER TDAPVMIFHV
SCASAAKAVA DARARGAPVF AETCPHYLFM TADILDKPGV EGAKWMCSPP QRTERDQAAL
WAALNDGTLD LISSDHAPYR FDKTGKLKNG LSPPFPDIAN GLPGLETRLP LLFDAIVKRS
KLPSAAFAAL TAGAAADIYG LPGKGRLRPG ADADIVLWDP EKSYTYGADD LHDNVGYNPY
EGHCVTGWPV NVFLRGQRIV RDGALTAHPG QGRWIDRRPT
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