| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1466 |
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| Symbol | |
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| ID | 3933913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1435683 |
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| End bp | 1436711 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903816 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_509408 |
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| Protein GI | 89053957 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.613245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC AACCTCGCAT TCACGCCGAC GCGGCGATGG AGACCGGACT GAAACGGTTC
GGGCGGTATC TGGCCGACAA TCCGGTGATC CCGCTGATCG CCTTCCTCTT CCTGTTGATC
GCTGTGCTGG AGATCATGCG CCCCGGCATC GTGACACCGT TTCGCGCCGG GCGGGATGGG
ATCATTTCGA CCTTCTGGGT CGGCAATTTG ATCAAATTCG CGATCCCACT GGCGATGCTC
GCGGCCTGCC AAGTGTTAAC CATGTTAACT GCCGGCATCG ACATGAGCGC TGGCATTCTT
GCGACCGTTG CGGCCTTCGT TTGTGCCACG CTGTCGCCGC TGATTGGCGT CACGCCCGCC
GTCCTTGTCG CGCTTGGCGC CGGGGTTGTC GCGGGCCTGG TGAACGGGTT CGGCGTGGGG
GTCGTGCGGG TGCATCCGCT GATCATGACG CTGGGGACGG GCTTGATCGC GACGGGTTGT
CTTCAGGTCT ATCAACGCTT CGTCATCTCG ACCGGGACCC TGATCCCCGA GGCGCTGGAA
TGGCTTGGCA CCGGGCGCAC GGCGGGGCTA CCCAACGGGC TTTTCGTCTT CATCCCCTTT
GCCGCGATTA TCCTTTATAT TATGCGGTTT ACGGGCTTCG GGCGGCTCCT TTTTGCGCTG
GGTTCCAATG AGGCGGCGAC CAAGCTCAGC GGGGTGCGGT CGTGGCAGGT CTACCTCGCG
CTCTACGCGC TCTCGGGCCT GATCGCGGCG CTTGCGGGGC TGCTCTATCT TGGCATGATC
CGCACACCGT CTCTTTCCTT GGCCAACCCG CTTCTTCTGC CGTCGGTGGC CGCCGCCGTA
ATCGGTGGCA CCTCCATCTT CGGCGGGCGG GGCAGCTTTG CTGGCGCCAT CGTAGGGGCC
TTGATCCTGC GCGTGATCGA CACGATGCTG ACGCTGCTGC AAATGCCCGA GGGCGCACGG
ATCGCGCTGT TCGGTCTGAT CATCCTTCTC GTCACCGCGC TATATGTGCG CATCACAGGG
GCCCGTTAA
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| Protein sequence | MSDQPRIHAD AAMETGLKRF GRYLADNPVI PLIAFLFLLI AVLEIMRPGI VTPFRAGRDG
IISTFWVGNL IKFAIPLAML AACQVLTMLT AGIDMSAGIL ATVAAFVCAT LSPLIGVTPA
VLVALGAGVV AGLVNGFGVG VVRVHPLIMT LGTGLIATGC LQVYQRFVIS TGTLIPEALE
WLGTGRTAGL PNGLFVFIPF AAIILYIMRF TGFGRLLFAL GSNEAATKLS GVRSWQVYLA
LYALSGLIAA LAGLLYLGMI RTPSLSLANP LLLPSVAAAV IGGTSIFGGR GSFAGAIVGA
LILRVIDTML TLLQMPEGAR IALFGLIILL VTALYVRITG AR
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