| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1458 |
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| Symbol | |
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| ID | 3933905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1427403 |
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| End bp | 1428125 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903808 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_509400 |
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| Protein GI | 89053949 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.816874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATC TTGCGGGCAA GGTGATCCTG GTGACCGGTG CCGCGCGCGG AATAGGCGCG
GCGATTGCCT CGGCCTGTGT GGATGCAGGG GCGGAGGTGA TTGGGGTAGA TCGCGACCCG
GTGCCCGGTG GGATTTTGTC GGATCTATCG CAAGCCGCCG CCCCGGAGGC GGTTGTGGCG
GAGGCGCTGG ACCGTTCTGG TCGGCTCGAC GGGCTTGTGA ATGCGGCAGG CGTGACCACC
CGCGCGTCTT TTCTGGACGC GGATGTTGCG CGGTTCGATC AGGTCATGGC CGTGAACCTG
CGTGCGCCGT TCTTCCTGAT GGCCGGGGTG ATTGCACACC TTCGGGGGCG CGATGCGCCA
GGATCCATCG TAAACATCCA GTCAATGAAC GCCCATTGCG GCGTGCCGGA TCTGGCGATT
TATGCTGCCA GCAAAGGCGG GTTGCAAACG CTGACGAGGA ACGCGGCGCA GACCCATATG
GCGGACCGTA TTCGGGTGAA CGGCATCAAC CTTGGCTGGG TCGCGACCGA GACCGAGCGT
GCAGTTCATG GTGACAAAGG CGTGCGTTGG CTGGACGGCG AGGCGGCCAG ACAGCCATTG
GGACGCTTCG TGACAGACGT GGAATGCGCG GCGCAGGCCG TCTGGATGTT GTCCGATGCC
GCCCGCCCGA TGAGCGGTGT GTGTCTTGAT CTGGAGCAAT GGATCGCAGG CGCACCGCCC
TAG
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| Protein sequence | MSDLAGKVIL VTGAARGIGA AIASACVDAG AEVIGVDRDP VPGGILSDLS QAAAPEAVVA
EALDRSGRLD GLVNAAGVTT RASFLDADVA RFDQVMAVNL RAPFFLMAGV IAHLRGRDAP
GSIVNIQSMN AHCGVPDLAI YAASKGGLQT LTRNAAQTHM ADRIRVNGIN LGWVATETER
AVHGDKGVRW LDGEAARQPL GRFVTDVECA AQAVWMLSDA ARPMSGVCLD LEQWIAGAPP
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