Gene Jann_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1446 
Symbol 
ID3933893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1415478 
End bp1416848 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content65% 
IMG OID637903796 
ProductL-glutamine synthetase 
Protein accessionYP_509388 
Protein GI89053937 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGTCAA ACGATATTCT CGAACAGGTT TGCGCGAAAG GGATCGAGAC CATCCGCGTG 
GTGTTCGCCG ATCCCCACGG CATTCTGCGC GGCAAGACGA TCACCGCGTC GGCCCTGCCT
GGCGCGCTGG AAAACGGCAT CCGCGTGCCG TCGACGCTGT TGCTCAAGGA CCTGTCCCAC
CGCACCGTCT TTCCGGTCTG GCATGCAAAT GGCGCACCGA TGCGGGGGGC CTCCGACGTC
CTCCTGCGTC CCGATCCGGC CAGTTTCAGA CAATTGCCCC ACGCGCCCCA TTCAGCGCTG
ATCCATTGTG ATATAACGGC TTTGGATGGC GCGCCGATCC CCGTGGCGCC CCGTGACATT
CTGCGCCGCT GCGAGGAGGC CTTGGCCGAG GAGGGGCTGG CGGCCGTGTT CGGGCTGGAG
GTGGAGTTCC AGATCTACCG CGTCACCGAC CCGCATCTTG CGCCGGAGCA CGCCACCATG
CCGGGCCGTC CGCCGCTGGT CGAAAACACG ACGCAAGGCT ACCAATACCT GACCGAAACG
CGCTACGCGG AGGCCGAAGA CATGCTCGAC CGTCTTCGCC GCGCCGCGGA GGAGATGGGG
ATCGACGTCC GCTCTGTCGA GATCGAAATG GGCCCCTCGC AATTCGAATT TACCTTCGCG
CCCGGCCCCC CCAGCGCGGT CGCGGAGGCC ATCATCACCT TCCGCATGCT GGCGAGGGAT
CTCTGCGCGC GACACGGGCT TTTGGCGAGT TTCATGCCCA AGCCTGCCCT GCCCAATGCG
GCCGCCAATG GCTGGCATAT CCACCAGAGC CTGACTGACG CGACCGGAGC TAACCTTTTC
ACGCCAAACG ACAATACTCT CACCGATACC GCCGCCCATT GGATCGCGGG GCTGCTGGAT
CACGGCCCCG CCTGCTGCCT GCTGACCAAC CCCACCGTCA ACAGCTACAA GCGGTTCGTC
CCCCATCAAC TGGCCCCCAA CCGCGTCGGG TGGGCCTATG ACAATCGTGG CGCCATGGTC
CGCGCATTGA CCGCGCCGGG CGACCCTGCC AGCCGGGTTG AAAACCGCCT GCCGGACAGC
GCCATCAATC CGTATCTCGC CTTCGCCGCG CAGATTATCT CGGGCCTCGA CGGGCTGCGA
AGCGCCACGC AGCCACCGCC GCCGATGGCT GATCCCTATG GCGCTGACGC CCCCGATTTG
CCGTCCAACC TGGGGGCCGC AATCGATGCT TTCGCGGCCT CGGACACCCT GCGCGCGGCC
CTGACGCCGG AGGTCGCGGA CTGGCTGATC ACCCTCAAAC GGGCGGAATG GGACCGCTAT
CTTGGCCATA TCTCGGATTG GGAACAGGCG GAGTATTTTG CCACCTTCTA G
 
Protein sequence
MTSNDILEQV CAKGIETIRV VFADPHGILR GKTITASALP GALENGIRVP STLLLKDLSH 
RTVFPVWHAN GAPMRGASDV LLRPDPASFR QLPHAPHSAL IHCDITALDG APIPVAPRDI
LRRCEEALAE EGLAAVFGLE VEFQIYRVTD PHLAPEHATM PGRPPLVENT TQGYQYLTET
RYAEAEDMLD RLRRAAEEMG IDVRSVEIEM GPSQFEFTFA PGPPSAVAEA IITFRMLARD
LCARHGLLAS FMPKPALPNA AANGWHIHQS LTDATGANLF TPNDNTLTDT AAHWIAGLLD
HGPACCLLTN PTVNSYKRFV PHQLAPNRVG WAYDNRGAMV RALTAPGDPA SRVENRLPDS
AINPYLAFAA QIISGLDGLR SATQPPPPMA DPYGADAPDL PSNLGAAIDA FAASDTLRAA
LTPEVADWLI TLKRAEWDRY LGHISDWEQA EYFATF