| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1424 |
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| Symbol | |
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| ID | 3933871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1393637 |
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| End bp | 1394635 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903774 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_509366 |
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| Protein GI | 89053915 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000379312 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.706266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTAA CACTCAAGGA TGTGGCGGAA CGCGCGGGCG TCTCGACCTC CGCCGTGTCG
CGCACCTTCA CCGAAGGGGC GTCCGTCTCG CCCAAGACCC GCGCCAAGGT GGAGCGCGCC
GCCGATGCGC TGGGATATTC CCCCAATGCG CTGGCCTCCT CGCTGACCAC GGGGCGCACG
AAATTGATTG GGCTGGTCTC CAACAACTTC CACAACCCTC TGTTTTTGGA GGTTTTTGAC
AGGTTCACGC GGGGATTGCA GGACCGCGGC CTGCGCCCGC TTCTAGTCAA CCTGTCCGAT
GAGACGGACC CGATCAGCTC CGTCCGGATG ATGCGGCAAT ATTCCGTCGA TGGCGCGATT
ATCGCCTCCT CCACCCTGCC GCCAAGTTTT GCGGAGGCCT ACCGGATGGC GGGCATCCCC
GTCGTCCATT CCTTCGGCCG CTACACCACC GCGCCCCAGG TTCACGTCGT GGGTATCGAC
AATGTCGCCT GTGGGCGAAT GGCGGGAGAA GCCCTGATTT CAAGAGGTTA CAGGCGCGTC
GCGTTCCTCG GCGGTCCAGA GGGGGCAACG TCGACGCAGG ATCGCGCGCT TGGGTTTCTG
GGGGCCTTGC ACGAACACCC CGAGATTGAG GTGACCGTCA GCTATGCGCA GGCCTATTCC
TTCGACGCGG GCCGGGTCGA GATGACCAAG CTCCTGATGT CCGACCCAGC GGAGGCCTAC
TTTTGCGGTG ATGATGTTCT ATCGGTCGGC GCTTTGTCGG CGGTGCAGGA GGCCGGGCTA
TCCGTGCCCG GCGACATCGG CATCATCGGG CTCAACGACA TGCAGATGGC GGGCTGGCAG
AATATTAACC TTACCACGAT CCGCCAACCG GTGGCCGAGA TCATCGGCGC GTCGATTGAT
TTGGTGATCG GCACCGTGGA GGATCCGAAG CGCCATCCCG AGACGCGGCT ATTCCCCTGC
CGCGTGATCG AACGGGGCAC CTTGCGGAAG GTGCCTTAG
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| Protein sequence | MAVTLKDVAE RAGVSTSAVS RTFTEGASVS PKTRAKVERA ADALGYSPNA LASSLTTGRT
KLIGLVSNNF HNPLFLEVFD RFTRGLQDRG LRPLLVNLSD ETDPISSVRM MRQYSVDGAI
IASSTLPPSF AEAYRMAGIP VVHSFGRYTT APQVHVVGID NVACGRMAGE ALISRGYRRV
AFLGGPEGAT STQDRALGFL GALHEHPEIE VTVSYAQAYS FDAGRVEMTK LLMSDPAEAY
FCGDDVLSVG ALSAVQEAGL SVPGDIGIIG LNDMQMAGWQ NINLTTIRQP VAEIIGASID
LVIGTVEDPK RHPETRLFPC RVIERGTLRK VP
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