| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1420 |
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| Symbol | |
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| ID | 3933867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1388400 |
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| End bp | 1390271 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903770 |
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| Product | thiamine pyrophosphate enzyme protein |
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| Protein accession | YP_509362 |
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| Protein GI | 89053911 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.406796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.238501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCACATCTAC CATTCGGCTG ACGGTAGCCC AGGCCATTGT GCGTTACCTC
ATGAATCAGT TCATCGAGAT TGATGGCGTC GAGACCCGGA TCTGCGGAGG CGGATTCGGC
ATTTTCGGGC ACGGCAACGT GCCATGCCTG GGGGAAGCGC TTTACCCTGT GCAGGACGAG
ATGCCGCTTT ACCGTGGGCA GAACGAGCAA AGTATGGGGT TTGCCGCCGC CGCTTACGCG
AAATATCATC TGCGTCGCCG CTTCATGTTT TGCACGGCAT CAGCCGGGCC CGGAACGGCA
AACCTGCTTA CGGCATCTGC CTTGGCGCAC GCAAATCGCT TGCCATTGCT GATGTTGTGC
GGCGATACCT TTCTGACCCG TCTGCCCGAT CCGGTCCTGC AACAACTGGA GCACTTCGGA
AACCCAACGC TTGGCGTGAA CGATGCATTC AAGGCCGTGA CGCGCTTCTG GGATCGAATC
ACGCATCCCG CACAGCTGCT GAATGCGCTA CCTGCCGCCC TTGCGACGAT GCTGGACCCT
GCCGATTGCG GGCCCGCGTT CCTCGGATTG CCGCAAGATG TCCAGGGGTG GGCGTATGAT
TATCCCGAGG TCTTCTTCGC CCGCCATGTG CATCGCATCC GGCGACAAGC ACCTGATCCG
GCTGAGGTTT TTGATGCCGC AGCCCTTTTG GTTAACGCAA GGCGACCCGT GATCATCGCG
GGCGGCGGCG TGCAATATGC TGGCGCAGTG GACGCGCTGA CCCAATTTGC CGACACACAC
AACATTCCCG TGGTGGAGAC CATCGCAGGC CGCGCTAACA TGGTGGCAAC AAATCCGTTA
AATATCGGGC CCTTGGGTGT AACCGGGTCA GATTCAGCCA ACGCCATCGC CGCCGAGGCC
GATGTGATTT TGGCCGTTGG CACACGGCTT CAGGACTTCA CAACAGGTTC ATGGACAGCG
TTCGCCCATG ATGCGCAGAT CATCGGCATG AATGTTGGCC GTCATGATGC AGCAAAACAT
CTGTCTTTAC CGGTCGTTGG CTGTGCAAAA CTCAGCCTCC CCGCATTAAG CGCGGCACTG
TCAGACTACT CCGCGCCCGA GGCCTGGATG ACAAAAGCGC AGGCAGGACG CGCAAGTTGG
GACGCTTACG TGGTCGAGAA CGTGGCGCAC GGGAACCGCC CTAATTCCTA CGCGCAGGCC
ATCGGTGTGG TGAATGCGCT TTGCGACACA CGGGACCGCG TTGTCACGGC TGCGGGAGGG
CTTCCGGCCG AGGTCACTGC CAACTGGCGA ACGCTCGACA TTGGCACCGT CGATGTGGAG
TTCGGTTTCT CCTGTATGGG CTATGAGATC GCTGGTGGAT GGGGTGCAAA AATTGCACAA
TCCGAGCAAG AGCCCACAGC GGATACCATT GTTTTCGTCG GAGACGGTAG CTATCTCTTG
ATGAATTCCG ATATCTACTC AAGCGTTCTG ACTCGGAAGA AACTTATCGT TCTGGTCCTC
GACAACGGTG GTTTTGCGGT CATCAACAAG CTGCAAAACA ATACCGGAAA CGAGAGTTTC
AACAACCTTA TCGCGGATTG CCCCACTATA CCGGAGCCGT TCACGGTCGA CTTCGAAGCT
CACGCGCGCG CCATGGGGGC GCATGCGGAA ACCGTGTCCA ACCCAGCAGA ACTGGCAGAT
GCATTCCAGC GGGCGAAGAC GGCGGACAGG ACTTCTGTCA TCGTCATGAA GGTCGACCCC
TATGACGGCT GGACCACCGA AGGCCACACA TGGTGGGAAG TTGGGACGGC CCAGGTGTCC
GACAACCCGA ATGTCCGCGA AAAGCATGCG GAATGGGAAG CGGACCGTAA CAAGCAGCGA
CAGGGCGTGT GA
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| Protein sequence | MTEPTSTIRL TVAQAIVRYL MNQFIEIDGV ETRICGGGFG IFGHGNVPCL GEALYPVQDE
MPLYRGQNEQ SMGFAAAAYA KYHLRRRFMF CTASAGPGTA NLLTASALAH ANRLPLLMLC
GDTFLTRLPD PVLQQLEHFG NPTLGVNDAF KAVTRFWDRI THPAQLLNAL PAALATMLDP
ADCGPAFLGL PQDVQGWAYD YPEVFFARHV HRIRRQAPDP AEVFDAAALL VNARRPVIIA
GGGVQYAGAV DALTQFADTH NIPVVETIAG RANMVATNPL NIGPLGVTGS DSANAIAAEA
DVILAVGTRL QDFTTGSWTA FAHDAQIIGM NVGRHDAAKH LSLPVVGCAK LSLPALSAAL
SDYSAPEAWM TKAQAGRASW DAYVVENVAH GNRPNSYAQA IGVVNALCDT RDRVVTAAGG
LPAEVTANWR TLDIGTVDVE FGFSCMGYEI AGGWGAKIAQ SEQEPTADTI VFVGDGSYLL
MNSDIYSSVL TRKKLIVLVL DNGGFAVINK LQNNTGNESF NNLIADCPTI PEPFTVDFEA
HARAMGAHAE TVSNPAELAD AFQRAKTADR TSVIVMKVDP YDGWTTEGHT WWEVGTAQVS
DNPNVREKHA EWEADRNKQR QGV
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