| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1407 |
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| Symbol | |
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| ID | 3933854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1376516 |
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| End bp | 1377550 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903757 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509349 |
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| Protein GI | 89053898 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0833584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTTG GACGGGAAAA CTCATCATTT CAAATATGCA ATTCTTCGCA AGACATCAGA
AAAAGTGATA TACTTGATGC CATGTCTATC CGCTTTCGTC AGCTGCAAGC CTTCCACGCC
ACCTTTGAGA CGGGCACCGT CACAGGGGCG GCGACGCTTC TGGGGATCTC TCAACCCGGC
ATCTCAAACC TCCTCGCGCA ATTGGAACGG GAAACGCGGT TCAAGTTGTT CGAACGGGTC
AAAGGCCGCC TGATCCCAAC GCCGGAGGCG GGTGTTCTGT ATCAGGAGGT CGACACGGTT
GTGCGCGGTC TTGACCATGT GGGACAGGCC GTCACCGATC TGCAGAACAA GCAGGGCGGG
CAGTTACAAG TCGCCTCCCA ACACGCGATG TCCTTTGGGT TCATGCCGAA ACTGATCGCG
CAATTCGCCA AAACGCGGCC CGATATGTCG ATCTCGTTTC AGTCGCAATA TTCTAGCAAG
GTGCAGGAAT GGGTGATGTC GGGCCTGTTT GAGATTGGCG TTTGTGAAAC GCCGCAGCTT
TACGACGCGC TCGACACGCA TCCCTTCCAG GTGGAGATGC AATTGACGCT GCATCCCGAC
AATCCCCTTG CGCGCCATGA CATTCTAACG CCCGAACTCT GTGGGGCGGA GCCCTTCATA
GTGATGGGCC CGGACCACAT GACCCACCGC CGCACGCGCG AAGCGTTTCA CACCGCTGGC
GTTCCGTGGA ACACGCGGGT CCACACGCAT CTCTTCAAGA ACATGCTGAG TTTTGTGCAG
GAAGATATGG GGGTCGCGAT CCTTGATCCG TTCCTGCTGG ACCATGATGA AAGTGGCAGC
TTCGTCACCC GCCCGTTCGC GCCCGCGATC CACATGGACA TGATGGTGAT CACATCGGCC
ACGCGGCCCC TGTCCACATT GGCGCTTGAT TTCCTTGACC TCCTGCTGAC AGGAATCGCC
CAAAGCGACA GACGCCGTGT CAGCCCATCC AACGCCGCAC CGGGGCGGCC GCCTCTTCCA
ATGGCTGCGC GATGA
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| Protein sequence | MHVGRENSSF QICNSSQDIR KSDILDAMSI RFRQLQAFHA TFETGTVTGA ATLLGISQPG
ISNLLAQLER ETRFKLFERV KGRLIPTPEA GVLYQEVDTV VRGLDHVGQA VTDLQNKQGG
QLQVASQHAM SFGFMPKLIA QFAKTRPDMS ISFQSQYSSK VQEWVMSGLF EIGVCETPQL
YDALDTHPFQ VEMQLTLHPD NPLARHDILT PELCGAEPFI VMGPDHMTHR RTREAFHTAG
VPWNTRVHTH LFKNMLSFVQ EDMGVAILDP FLLDHDESGS FVTRPFAPAI HMDMMVITSA
TRPLSTLALD FLDLLLTGIA QSDRRRVSPS NAAPGRPPLP MAAR
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