| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1372 |
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| Symbol | |
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| ID | 3933819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1340578 |
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| End bp | 1341774 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903722 |
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| Product | ROK |
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| Protein accession | YP_509314 |
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| Protein GI | 89053863 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.436863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.250954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC CCACCGACAA TACACCTAGT GCCCGCGATG CGGCCTCCGT GGGGCGCGGT
ACGAACCAGG GCGGTATGCG GGAATCGAAT GAACGCGTGG TCCTGACATT GCTCAGACGC
CAGTCAGATA TGGCGAAAGC CGACATTGCC CGGAGCACTG GGCTATCGGC CCAGACGGTC
GCCCGCCTGA TCGGATCGCT GGAGGCCGAT GGTCTGATCG TGCGCGGCAC GCCGCAGAAA
GGGCGCATCG GACAGCCATC CGTGCCCTTG TCCCTCAACC CCGACGGCGC AGTGTTTTTG
GGGATGAAGG TCGGTCGCCG GTCGGTCGAA ATGATCGCCA CGGATTTCAT GGGGCAGATC
ATTGGCCGCG AGAAGGAGAT CTACGACTAC CCCGACTTCG ACGCCGTGTT GAGGTTTGCG
ACCCAGACTG CGGCCGCCCT CAAAGCACAT CTGCCCGCCC CACTGCGCAC ACGTATTGCC
GGTATGGGCA TCGCGATGCC CTTTTTCTTA TGGAGTTGGG CCGAACAGAT CGGCGTGGAC
CAATCCCAGA TGGCCGATTG GCAGCACCGC GACCTGCAGG CGGAGGTCGC GACAGCACTT
GATCTGCCCG TCTTCTTGCA GAACGACGCC ACGTCGGCGT GCAGCGCAGA GCTTGTCTTC
GGAACACATC CCCTGCCCCG CAATGCGCTG TGTTTTTACA TCGCGTTCTT CGTCGGCGGC
GGACTGGTTC TGAACAACGC GCTCTTTACC GGAACCACCG GCAATGCAGC GGGCTTGGGG
CCGCTCCACG TCCCCGATCA GGCTGGCGTT CCGCGTCCGC TGATCGAGCT GGCGTCGCTG
GCCACGCTGG AGGCCGCGAT GGAGGCGCGC GGCCAGGCCC GCCGCAAGAT GTGGGACACC
CCCGAGCGCT GGGACGTGCC GCAAGATCTG CTCAACACCT GGGTCGACAG CTGCGCGCCC
GCACTGGCCC ATGCGATCCG GTCCGTGCAG ACGATCCTGG ACCTGGAGAT GGTGCTGATC
GACGGCTGGC TGCCCCGCGA CTTGTGCCTG ACCGTGACCC AGCGTGTGCA ACGGGAATTG
GCCGCATTCA GCATGACGGG CATGCACCGA CCCGAGGTGC GGCACGGCTC CCTTGGCGCG
GATGCCCGGG TATTGGGTGC AGCCAGCCTG CCGCTCAGCC GCCGGTTCTT GGTGTAG
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| Protein sequence | MTNPTDNTPS ARDAASVGRG TNQGGMRESN ERVVLTLLRR QSDMAKADIA RSTGLSAQTV
ARLIGSLEAD GLIVRGTPQK GRIGQPSVPL SLNPDGAVFL GMKVGRRSVE MIATDFMGQI
IGREKEIYDY PDFDAVLRFA TQTAAALKAH LPAPLRTRIA GMGIAMPFFL WSWAEQIGVD
QSQMADWQHR DLQAEVATAL DLPVFLQNDA TSACSAELVF GTHPLPRNAL CFYIAFFVGG
GLVLNNALFT GTTGNAAGLG PLHVPDQAGV PRPLIELASL ATLEAAMEAR GQARRKMWDT
PERWDVPQDL LNTWVDSCAP ALAHAIRSVQ TILDLEMVLI DGWLPRDLCL TVTQRVQREL
AAFSMTGMHR PEVRHGSLGA DARVLGAASL PLSRRFLV
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