| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1305 |
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| Symbol | |
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| ID | 3933752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1264396 |
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| End bp | 1265379 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903655 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_509247 |
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| Protein GI | 89053796 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTA CATCCAATCG CCGACAGCTT CTGATCGGCG CCGCCGCCAC GCTCGCCCTG
CCCGCCTACA TCCGGCGCGC CAACGCCCAA AGCGTGATCC GCATTGCAGG CGTGCACAAC
TCTCCGGTCG AGAACGCGTG GAACAGTCGC ATTCACCTGG CCTTCCAGGA AGCGGCAGCG
TCGGGTCTGA TCGAATATGA ATTCTCCGAA GGCGTGGCCC CCACCGACTA TCCCCGCGCC
ATGCGCGAAT ATGCGGAAAG CGGCGTGGAG CTGGTGTGGG GGGAGTCCTA CGCGGTCGAG
CGTGAAGCGC GCGAAGTGGC TGCCGACTAC CCCGATACGG CGTTCCTTAT GGGCTCGTCC
GGCGGGCCAG AGGGGGAAAA CTTTGGCGTT TTCGGCACTC GCAATCACGA GGCCGCCTAC
CTTGCCGGCA TGTTGGCGGG TCGGATGTCG GAGACAGGCG TGTTCGGCTC CGTCGGCGGT
TTCCCAATCC CAGAGGTGAA CCTTCTGATC AACGCGTTCC GTATGGGCGT CACCGAAGTG
AACCCCGATG CAACCTTCCT CAACGCATTC CTTGGCGCAT GGTTCGATCC GGCGCGCGCC
AAAGAGGCTG GGTTGGCGCA GATCGATGCG GGTGCGGACA TCTTGTTCGG TGAGCGCATC
GGTACAGCGG ACGCCGCTCA AGAACGCGGA GTGCGAGCCA TCGGATCGCT CATCGATTAC
ACTCCGCGTT ATCCGGGAAC CGTCTTCGCC AATGCGATTT GGAATTACGG CCCGACGATT
GAAGCCATCG TTGCGGATGT GCAGGCCAGT ACCCCCGTGG GCCGCGACTA CACGGAGTAT
TCGTTCATGG TCCACGGCGG CAACGAATTG ATCTACGTGG CCGACGAAGT CCCAGCTGAT
GCCATCGCAT CCATGGAAGC CCGTCAGGCG CAAATCCAGT CCGGCGAATG GGACGTGCCG
ATTGATAACG ACGAGCCGGC CTAA
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| Protein sequence | MTLTSNRRQL LIGAAATLAL PAYIRRANAQ SVIRIAGVHN SPVENAWNSR IHLAFQEAAA
SGLIEYEFSE GVAPTDYPRA MREYAESGVE LVWGESYAVE REAREVAADY PDTAFLMGSS
GGPEGENFGV FGTRNHEAAY LAGMLAGRMS ETGVFGSVGG FPIPEVNLLI NAFRMGVTEV
NPDATFLNAF LGAWFDPARA KEAGLAQIDA GADILFGERI GTADAAQERG VRAIGSLIDY
TPRYPGTVFA NAIWNYGPTI EAIVADVQAS TPVGRDYTEY SFMVHGGNEL IYVADEVPAD
AIASMEARQA QIQSGEWDVP IDNDEPA
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