| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1290 |
|---|
| Symbol | |
|---|
| ID | 3933737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1252492 |
|---|
| End bp | 1252809 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637903640 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_509232 |
|---|
| Protein GI | 89053781 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.167958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGGG TTTATCTCTT CATCGCAGGT GCCTTGGAAG TCGCTTGGGC GACGGGGCTC
AAGAAGCTCG GCATTGGCTT CTCATGGACA CTTGGCGTAC TGACCCTCAT CGCAATGATC
GCAAGCATCA TTGCCCTCTA TGCCGCTATG ACCCGCCTCC CGCTTGGAAT TGCCTATCCG
ATCTGGACGG GCATCGGCTC TGTCGGATCG GTGCTGGTGG GCGTGTTGGC CTTCAATCAA
AACCTCAGCT GGTCGGGTAT TGCAGGTTTG GCACTTCTGA TTGCGGGGAT GTTTCTGCTC
GGGTCAGATG CGCACTAA
|
|---|
| Protein sequence | MAWVYLFIAG ALEVAWATGL KKLGIGFSWT LGVLTLIAMI ASIIALYAAM TRLPLGIAYP
IWTGIGSVGS VLVGVLAFNQ NLSWSGIAGL ALLIAGMFLL GSDAH
|
|---|
| |