| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1276 |
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| Symbol | |
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| ID | 3933722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1236375 |
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| End bp | 1237499 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637903625 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_509218 |
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| Protein GI | 89053767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0470] ATPase involved in DNA replication |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.303691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATG ACGCCCTACC CGAATCCGAC CGCCTCGATG GGGCACCCCA CCCGCGCGAC
GCCGCGCGCC TCTTCGGCCA TGCAAGCGCC GAGGCAGAGT TTCTGACAGC CGCCACCTCG
GGCCGCCTGC CCCACGGCTG GCTTCTCACC GGACCCAAGG GCGTCGGCAA AGCCACCTTT
GCCTGGCGCG CCGCGCGGTT TTTGCTGGCC ACACCTCCGC CGGAAGACGA CGGCATGTTC
GGTGCACCGC CGCCGCCCAC CTCGCTTGAT ATCGCGCCGG ATCACCCCGT CGCCCGTCGC
ATGGCGGCGC TGAGCGAGCC CGGGCTGTTC CTGCTGCGCC GCCCCGTGGA TGAGAAGGAC
CAAAAGAAGC TGAAGACCGT GATCACGGTC GACGAAGTGC GCGGATTGAA AGGGTTTTTC
CATCTTTCGG CTGGGGGGCA CCGCCGCGTC GTCATCGTCG ACAGCGCCGA TGAAATGAAC
CCGTCGGCCG CCAATGCCCT GTTGAAGGAA CTGGAGGAGC CGCCCGAAGG CGCGGTTCTG
TTCCTGATCT CCCACCGCCC GTCGGGTCTT CTGCCGACCA TCCGATCGCG CTGCCGGACG
CTTCGGTTCA ATCCTTTGGG GGATGCGGAC CTTGCTGATG CGCTGGTCCA GGCGGGCGCT
GACCCGCCCG AGGGCACGGC ACTTGCCACT CTGGCACAAG GCTCCGCCGG GACAGCAATT
TCGCTGGCGG ATCAAGGCGG GCCGTCGCTC TATGCTGATA TTGCCAAACT CTTGGGAACA
CTGCCGAATA TGGACAGGCA ATTGGCTCTT CGCCTTGCGG ATGGCGCCGC CGGAAAGGCC
AATGAGGCGC GGTTCGACCT GACTCTGTCC TTGCTGGATA TGGCGCTCTC GCGGGCGGCA
CGCATGGGGG CGACCGGGCA GGCCCCGGAC GAGATCACGC CGAATGAGGC CGCAACGCTC
GCCCGTCTCG CCCCCTCCCC CCAGCATGCC CGCGAATGGG CCAGCCTCGC CCAATCGCTG
ACCGCCCGCG CGCGGCGTGG CAAGGCGGTC AACCTTGACC CTGCGGCGCT GGTGTTTGAT
ATCTTCCTCG ACCTGGACCG GATGGCGGCC CGGCTGGCCG CATGA
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| Protein sequence | MSDDALPESD RLDGAPHPRD AARLFGHASA EAEFLTAATS GRLPHGWLLT GPKGVGKATF
AWRAARFLLA TPPPEDDGMF GAPPPPTSLD IAPDHPVARR MAALSEPGLF LLRRPVDEKD
QKKLKTVITV DEVRGLKGFF HLSAGGHRRV VIVDSADEMN PSAANALLKE LEEPPEGAVL
FLISHRPSGL LPTIRSRCRT LRFNPLGDAD LADALVQAGA DPPEGTALAT LAQGSAGTAI
SLADQGGPSL YADIAKLLGT LPNMDRQLAL RLADGAAGKA NEARFDLTLS LLDMALSRAA
RMGATGQAPD EITPNEAATL ARLAPSPQHA REWASLAQSL TARARRGKAV NLDPAALVFD
IFLDLDRMAA RLAA
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