| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1265 |
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| Symbol | |
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| ID | 3933711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1225355 |
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| End bp | 1226239 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903614 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509207 |
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| Protein GI | 89053756 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGC GTGCCCTAAA GACCCTTTCA AAAATTGCCC AGGTCGGGTC CTTCGTCCAA
TCGGCGGAGC AGTTGGGCAT GACGCTGTCG GCGGTGTCGA TGCAGATGAA GGCGCTGGAG
GCAGAATTGG GCGTGGCGCT GTTTGACCGA TCCGTGCGTC CGCCGCGCCT GACCCCCGTG
GCCGCCGCTG TGGTGACCGA GGCGCAGGCG CTGCTTCTGT GGGAGGATCG CCTGCTGGAG
TTGTGCCGCC CCAGTGACAC GTTGGTGGGC CAGTATAAGC TGGGCTTTGT CACCACCGCC
GCCGTGCGCC TGCTGCCGGA TTTCCTGAAG ACGGCGCAGG ATATGGCCCC CATGGCCAGC
TTTGAGGTCG AAACCGGTCT GTCGGCCACC CTGCAAGACA AGGTGATGAC CGGTCAGATT
GATGCGGCGG TCGTGACCGA TGCGGACGGT CTGCCGCCAC GCCTGTCGTC CCGGCTGCTA
CGGACAGAGC CGTTCGTGTT TGCCGCCCAT GGTGATCTGA TGGCGGATGG AATTGAGGGG
CTGATGACCC GTGACACGTT CTTTCATTTC ATGCCGGATA CGGGCATTGG CAAACTCATT
GCCCGCGCGA TGTTGCAGCA AAACCGCCCC GGAGCGGCGC GCACCATCGT TCTGGATGAT
CTGGAAGCGA TCATGGAATG TGTCGCCAGC GGCCTTGGGT TCACCCTGCT GCCGGTCCCG
GATGTGGAGC GATACCTGAC CCGGCAGGTC CGGACGGTGC CAGCGCCCGC GGGGTTGGAG
CGCAAGCTGG TGCTGGCCGT GCTGCGCGAC GGCGGGATGG CCCCCCGGGA GGCCGCGCTT
GGCGCACTTT TTGACGCGGC AGTTGATCCC ACGGGCCCGT CGTGA
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| Protein sequence | MQTRALKTLS KIAQVGSFVQ SAEQLGMTLS AVSMQMKALE AELGVALFDR SVRPPRLTPV
AAAVVTEAQA LLLWEDRLLE LCRPSDTLVG QYKLGFVTTA AVRLLPDFLK TAQDMAPMAS
FEVETGLSAT LQDKVMTGQI DAAVVTDADG LPPRLSSRLL RTEPFVFAAH GDLMADGIEG
LMTRDTFFHF MPDTGIGKLI ARAMLQQNRP GAARTIVLDD LEAIMECVAS GLGFTLLPVP
DVERYLTRQV RTVPAPAGLE RKLVLAVLRD GGMAPREAAL GALFDAAVDP TGPS
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