| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1253 |
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| Symbol | |
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| ID | 3933698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1208187 |
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| End bp | 1209068 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903601 |
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| Product | LytR/AlgR family transcriptional regulator |
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| Protein accession | YP_509195 |
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| Protein GI | 89053744 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.355028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATGG GATCGTGGGC GTGGATTGGC ATCAGACGTG CAATTGCCTA TCTACGACCA
AGGCTGCGGG CCGTTCGCCA GCGCCGCTTC GCAAACCGCA GGACAGGCTT CGTGAAAAAC
AGCCCCTCGC AGCTCGCGCT TCGCCAATGG CGGGCACAAT TCTCCAACCC CGTCACGCTC
CTGTTCCTTG GCGGCGTGGC AGCCCTGCTT GCGATTCTCG GCCCGTTCGA GACGGACTTC
CGCCTGACCC TCGCGCCGCG CTTTGCCTAT TGGCTGGCGA TGGCGGCGGC GACCTATTCG
GTTGGGCTGG TGATCAACAC CTGGTGCCAG CACGCTCTGC CATCGGCCTA CGCCATCCCG
GTGCGCCTGG GTGTCGCGGC AGGGGCGACG GGGCTTGCGG TGACGCCCGT CGTCGTGGCG
CTGAACTACC TGACCTTTGG GTATGTGCCG GAGGCGGGCG ACTGGACCAC CCTTCTGATG
CAGTTCTTTG CGATCTCACT GATCATCTCG GTCCTCTTTC ACGCCATCGG CACGACGCTG
CCCGATGACG CCGCCGGTGA CCGCACCCCT GCCCTGCTGG AGCGGCTCCC CCTCGACAAA
CGCGGGCCCC TCGTGGCGCT GTCGTCTGAA GATCACTACA CCCGCATTCG CACCACGCGG
GGGGAGGAGC TGATCCTGAT CCGCCTGTCG GACGCCATTC GGGAGGCAGA GCCCACGCCC
GGCTTGAAAG TCCACCGCTC TCACTGGGTG GCGCTGGATC AGGTGCAGGC CGCTGCGCGG
GACGGTGACC GCGCGGTGCT GACCGTGACC GGTGGGGGTG ACATTCCCGT CAGCCGCGCC
AATGTGGGGG CCATCAAGGA TGCGGGCCTG CTGCCCCAAT AG
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| Protein sequence | MGMGSWAWIG IRRAIAYLRP RLRAVRQRRF ANRRTGFVKN SPSQLALRQW RAQFSNPVTL
LFLGGVAALL AILGPFETDF RLTLAPRFAY WLAMAAATYS VGLVINTWCQ HALPSAYAIP
VRLGVAAGAT GLAVTPVVVA LNYLTFGYVP EAGDWTTLLM QFFAISLIIS VLFHAIGTTL
PDDAAGDRTP ALLERLPLDK RGPLVALSSE DHYTRIRTTR GEELILIRLS DAIREAEPTP
GLKVHRSHWV ALDQVQAAAR DGDRAVLTVT GGGDIPVSRA NVGAIKDAGL LPQ
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