| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1176 |
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| Symbol | |
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| ID | 3933620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1139598 |
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| End bp | 1140785 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637903524 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_509118 |
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| Protein GI | 89053667 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
[COG3743] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.194411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAC GCCTCCACCC CGAGCAACCC GATAGCTTTG CCTTCACGTC TGACAATCAG
GCCTGGGCGG AGGCTCAGAT CACAAAATAT CCCGAGGGGC GTGCGGCATC CGCGATCATT
CCGCTGCTGT GGCGCGCGCA GGAGCAGGAG GGGTGGCTGA CGCGCCCCGC CATCGAAGGC
GTGGCCGACA TGCTGGGTCT GGCGCATATT CGCGCGTTGG AAGTGGCGAC GTTCTACTTC
ATGTTTCAAC TGCAACCGGT GGGGGCGGTC GCCCATATCC AGATCTGCGG GACGCTGTCG
TGCATGATCT GCGGGGCCGA GGATCTGGTG GCTGTGGCAC GCGAAAAGAT CGCCGCGAAC
CCGCATCAGA TCAGCGCCGA CGGCAAATTT TCGTGGGAAG AGGTCGAGTG TCTGGGGGCG
TGTTCCAACG CGCCGATGGC CCAGATCGGC AAGGATTACT ACGAGGATCT GACGGCGGAG
AGTTTCGCCG GGATCATCGA CGCGATGGCG CGCGGCGAAG TGCCGACGCC CGGACCGCAG
ACTGAGCGCT ACGCATCTGA GCCTGCGGGC GGGCTGACCT CGTTGACAGA GCATGCGGCC
GGGCGGGACG AGCTGAACAT CTCGGCGCGG ATGGCCACCG ACATCGGCGA TACGATCAAG
CGGATTGACG GGACGGAAGT GCCGCTGCTG GCGCCTTGGG GTCGCCAATC GGGCGAAGGC
GTGCCGGACG AGCCTAAACG TCCGAAGCCC GCGAACCGGG CCGAGGGACG GCCCGCCGAC
GAGACCGGCG TGACCAAACA GGCAGCCCCC GCCAAGGAAA AGGCCCGCCC GAAACCCAGC
GCGCCACCGG CTAAGGGCAA TCCGTCGCCC GCGCCCAAGG GCGACCACGC CGCCGCAGGG
TCCGCGCCCG AGACGACCGG CTCGCCAAAG GTGAGCGATG TGGCTGAGCA GGAACCGGAG
CTGTTGAATA CTGCGCGGGA CGGCGGGGCC GATGACCTCA AGCGCATCAC CGGCGTGGGG
CCGAAGCTGG AGGGCGTGCT GAACGACCTC GGTTTCTACC ACTTCGATCA GATCGCGGCC
TGGGGCCCGG CAGAGATTGC CTGGGTTGAC GCGCGCCTCA AGTTCAAGGG CCGGATCGAG
CGGGATGACT GGGTCGGCCA GGCCGCCGGT TTCGCCGCGG AAGACTAG
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| Protein sequence | MLRRLHPEQP DSFAFTSDNQ AWAEAQITKY PEGRAASAII PLLWRAQEQE GWLTRPAIEG
VADMLGLAHI RALEVATFYF MFQLQPVGAV AHIQICGTLS CMICGAEDLV AVAREKIAAN
PHQISADGKF SWEEVECLGA CSNAPMAQIG KDYYEDLTAE SFAGIIDAMA RGEVPTPGPQ
TERYASEPAG GLTSLTEHAA GRDELNISAR MATDIGDTIK RIDGTEVPLL APWGRQSGEG
VPDEPKRPKP ANRAEGRPAD ETGVTKQAAP AKEKARPKPS APPAKGNPSP APKGDHAAAG
SAPETTGSPK VSDVAEQEPE LLNTARDGGA DDLKRITGVG PKLEGVLNDL GFYHFDQIAA
WGPAEIAWVD ARLKFKGRIE RDDWVGQAAG FAAED
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