| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1022 |
|---|
| Symbol | |
|---|
| ID | 3933466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 974950 |
|---|
| End bp | 975876 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637903370 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508964 |
|---|
| Protein GI | 89053513 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.88313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG TGGCGACAGA GCATGGCCTG GCCCGGCCCT CCCCGGGGTT GGCCGTTGCC
TTCATGCTCT GCGCCACGGC GTTTATTGCG GCCACCACCC TGCTGGCCAA GGCGCTCGGG
ACTGACGCGC TTGGCCCCGC GCTTCATCCG CTACAAGTCA GCCATGGGCG GTTTCTCTTC
GCCTGGGTCT CCATCATCAC CGTGGTGTCC ATCCTCCGCC CGCGCCTCAC CGCCCCGAAA
TGGAGCCTTC ACATCGGGCG CACAATCTGT GGCTTTGCGG GCGTCACCTG CATGTTCGCC
GCCGCCGCCC TGATCCCGCT CGCCGATGCC ACCGCGATCA GCTTTCTCAA CCCGGTCTTC
GGGATGATCC TCGCCATTCC CCTTCTTGGC GAAAAAGTCG GCAAATGGCG CTGGCTCGCC
GCCGCCATCG CCTTCGCGGG CGCGTTGATC CTGATCCGTC CCGGTGCCGG GGCCATCGCC
CCCGGTGCGC TTCTGGCGCT GGCGGCCGCC ATGGCCCTGG GGCTGGAGCT GACCTTCATC
AAACGGCTCG CCGGGCGCGA ACGTCCTCTT CAGGTCCTGC TCCTCAACAA CTCCCTTGGC
CTCGTGATCG CGACGCTTGC CGTGATCGCC GTCTGGCAGC CCCCGACCCC GGCGCAATGG
GCGGGCCTCG CCGCATTGGG CATCGTCATG GCCGCGGCAC AAGCCTGTTT CGTGAACTCC
ATGGCCCGCG CCGATGCCAG CTTCGTGACG CCGTTCTCCT ACCTCACGCT GGTCTTCGCC
GCCTTCTACG ATTTCGCCAT ATTCGGGGTA ACGCCCACCG GGCTGTCGCT GCTTGGCGCG
GGTATCATCA TCGCCGGTGC CGCGCTGCTG GCCTGGCGCG AGGCGCGGGC CGCAAAACCC
GCTACAATGC CCCCAGAAGC TCTCTGA
|
|---|
| Protein sequence | MTAVATEHGL ARPSPGLAVA FMLCATAFIA ATTLLAKALG TDALGPALHP LQVSHGRFLF
AWVSIITVVS ILRPRLTAPK WSLHIGRTIC GFAGVTCMFA AAALIPLADA TAISFLNPVF
GMILAIPLLG EKVGKWRWLA AAIAFAGALI LIRPGAGAIA PGALLALAAA MALGLELTFI
KRLAGRERPL QVLLLNNSLG LVIATLAVIA VWQPPTPAQW AGLAALGIVM AAAQACFVNS
MARADASFVT PFSYLTLVFA AFYDFAIFGV TPTGLSLLGA GIIIAGAALL AWREARAAKP
ATMPPEAL
|
|---|
| |