| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1017 |
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| Symbol | |
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| ID | 3933461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 971648 |
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| End bp | 972145 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903365 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_508959 |
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| Protein GI | 89053508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.520766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGA TCGGTCTGGT GGCGATATGC GCCCTGCTGG CGGGGTGCGG CGGCGGGATT
TTGGGGATCG GCGGTGGGGC GGAACCGGTG CAGGTGCAGC AGGGCCTCTA CCCCGGCGAA
ACGCCGGAAA TGCGCGCCTT GGTGGTGGAA TACGCCACCC GCCATGGGAT CCCGGAGGCG
CTGTTGCACC GGGTGATCCA GCGTGAAAGC GACTACCGTG CCGATGCGCG CAATGGGCCA
TATTACGGGC TGATGCAGAT CCTGCCGCAG ACGGCGGGCA CGATGGGGTT CACGGGCGCA
CCGAATGACC TGCTGGATGC GCGCACGAAC CTGGAATATG CGGGCCGCTA CCTGCGCGGC
GCTTGGCTGG TGAGCGACGG CGATATCGAC GAGGCCGTGG GATGGTATGC GCGGGGCTAC
TATTATGAAG CACGAGACCG GTGCCTTCTG GTGGAAACGG GCCTGCGCGA GCGCGAGGTC
AACCGCGCCT GCGGGTAG
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| Protein sequence | MKVIGLVAIC ALLAGCGGGI LGIGGGAEPV QVQQGLYPGE TPEMRALVVE YATRHGIPEA
LLHRVIQRES DYRADARNGP YYGLMQILPQ TAGTMGFTGA PNDLLDARTN LEYAGRYLRG
AWLVSDGDID EAVGWYARGY YYEARDRCLL VETGLREREV NRACG
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