| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1016 |
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| Symbol | |
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| ID | 3933460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 969681 |
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| End bp | 971651 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637903364 |
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| Product | AsmA |
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| Protein accession | YP_508958 |
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| Protein GI | 89053507 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.620407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.697565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTGGA TTTTTCGAGT GATCGGGGCG GTCATCGTCC TGTTTTTCTT GGCCTTGGGC
ACGGTGCTGC TGATCCCGGC GGAGCGGATC GCGCAGGTGG CCAGCGACCG GATCACGGCG
GCCACGGGCC GGACGGTGAC CATCAGCGGT GAGGCGCGGC CAACCCTATG GCCGGATCTG
GGCATTGTCA TCGAGGGTCT GCGCGTCGGC AACCCGGCCT GGGCGGGCCA TGCGCCGATG
ATCGAGGCCG CGCGGGTCAA TGTGGGCGTG GCGTGGAACG GGCTGCTGTC CGGCGATATC
CGGGTGGAGC GCGCCGTGTT TGAAGGTGCG CAGATCACGC TGGTGCGCGC CGCCGATGGC
CTGACGTCGT GGGATATGGG GGGCGGCGGA GAGGAGGCCA CCGGCGCGCC GGTCCAGATC
GGGTTTGATG AGGCGGTGAT CGTGGAGGCC CGCGTGCACT ATCTGGATGA GGAGGCGGGG
GCCGATTGGG ATGTCACACA GTTGAACGCG ACAATGCGCC TGCCCGAGGC GGGCGGCGCG
GTCGCGATTG AGGGAACCGC GCAGGTCAAC GGCGTGCCGC TGGAATTGGA GACCACAATT
GATGGCGTCG CAGCCCTGTT GGCCGGGGAG GCCCGCCCAC TGCAGGCCAA CCTGCGCTGG
CAGGGCGGGT CCGCCGCCTT TGACGGGGCG TTGGGATTGG ACGCCACGGC GCAGGGGGCG
CTGGACCTGA CGGCAGAAGA TCTTGGGCCG CTGGTGGCGC TGACCGGCGG CGCGATGCCC
GATCTGCCGC ACGGTCTGGG CCGGGACCGC ATTGCCGTGA CGGGCGATGT GCGTCTGGCG
CAGGAGGGGT CTGTGCATTT GCGCGAGGGG GTTTTGCGGC TGGATGAGAC GGTGTTGAGC
GTCGCGGCGG ACCTTCTGCC AGGGGAGGAT CGCCCGATGC TGCGGGGCAC GGTCACGGGC
GGCGACATCG CGCTTCCGGG GCTTCTGGCG AGTGGCGACG ACCGCACGGG CAGCGGGTGG
CCGCGTGATA TTATCGACGT CTCGGGTCTG TTCCTGACCG ATGCGGACCT GACGGTGCGG
GCCGAGAGCC TTGATCTGGG TGCTGTGACC TTGAGCGAGA TTGACCTGCG ATCGACCCTG
ACGCGCGGGC GGCTGGTGTT CGATATCGCC TCCATCCGCA CCTATGAGGG CCAGCTGGCG
GGGCAATTCG TAATCAATGG CCGGGGCGGG CTGTCGGTGG GTGGTGACCT GATCCTGGCC
AATGTGGCGC TACAGCCATT GCTGGGGGCG ATGGCCGATT ACGAGCGGTT GCAGGGCACA
GGCTCGGCCT CCGTCGAGTT TCTTGGGGTC GGCAATGATC TGCACACGAT CATGGATGGG
CTGGAGGCGG AGGGCGACAT TGCCCTGGGT CAGGGGGCCA TTCTGGGTCT GGACCTGGCG
GGCATGTTGC GGAATTTCGA TGCGTCGTTT CAGGGCGAGG GCCAACGCAC GGTCTATGAC
CGGGTGACGG CGGAGTTCCT GGTGCGCGAC GGGGTTGTGT TGAACGAAGA CCTGTTGCTG
GACGCGCCCT GGGGAGAGGT GCGCGGCGCG GGAGAGGCGG ATCTGGCGGC CATGAGTGTC
GACTATACGC TGGTGCCGGG TGTGTTCCGG GACGCCGACG GGGTGGCGGG CCTGCGGGTG
CCGATTGCCA TCACCGGGTC CTGGTCCGCG CCCCGAATCG CGCCGGATCT GGCGCTGCTG
GCGGAATACG AACTGGCCGA GGAACGGGAG CGGCTGGAGG CCGAGGCCCG CGCGGCGTTC
GAGGCGGAGG AGGACCGTCT GGAAGAGCTG GCACGCGCCC GCGCGAACGA GGTTCTGGGC
ACGGATATTC AGGCGGGCGA CACGCCCGGG GACATAGAAG AGCAACTGAC CGAGGAATTG
ATCGACGGCA TGCAGCAATT GATCTTCGGC AATGGAGGGG CAGGGCAATG A
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| Protein sequence | MRWIFRVIGA VIVLFFLALG TVLLIPAERI AQVASDRITA ATGRTVTISG EARPTLWPDL
GIVIEGLRVG NPAWAGHAPM IEAARVNVGV AWNGLLSGDI RVERAVFEGA QITLVRAADG
LTSWDMGGGG EEATGAPVQI GFDEAVIVEA RVHYLDEEAG ADWDVTQLNA TMRLPEAGGA
VAIEGTAQVN GVPLELETTI DGVAALLAGE ARPLQANLRW QGGSAAFDGA LGLDATAQGA
LDLTAEDLGP LVALTGGAMP DLPHGLGRDR IAVTGDVRLA QEGSVHLREG VLRLDETVLS
VAADLLPGED RPMLRGTVTG GDIALPGLLA SGDDRTGSGW PRDIIDVSGL FLTDADLTVR
AESLDLGAVT LSEIDLRSTL TRGRLVFDIA SIRTYEGQLA GQFVINGRGG LSVGGDLILA
NVALQPLLGA MADYERLQGT GSASVEFLGV GNDLHTIMDG LEAEGDIALG QGAILGLDLA
GMLRNFDASF QGEGQRTVYD RVTAEFLVRD GVVLNEDLLL DAPWGEVRGA GEADLAAMSV
DYTLVPGVFR DADGVAGLRV PIAITGSWSA PRIAPDLALL AEYELAEERE RLEAEARAAF
EAEEDRLEEL ARARANEVLG TDIQAGDTPG DIEEQLTEEL IDGMQQLIFG NGGAGQ
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