| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1010 |
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| Symbol | |
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| ID | 3933454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 965077 |
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| End bp | 966177 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903358 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_508952 |
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| Protein GI | 89053501 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.942652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.837706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG GCTTTTTCTG GGATGAGCGG TGTTTCTGGC ATTCGGGCGG GAATTATGCA
GGTCTGTTGC AGGTCGGCGG CCTGATCCAA CCGGGCGGCG GGTTGCCCGA AAACCCCGAG
ACCAAGCGTC GCCTCGTCAA TCTGTTGCGC GTCACCGGGT TGTGGGAGGG GCTTGCGACC
CAACAGGCCA CCCCCGTGAC GCAAGACGAC CTCCTGCGCA TTCATCCGTC CGACTATCTC
GCCAGCTTCA GGGCCAAATC GGCGGAGGGC GGCGGAGAGT TAGGCCTGCG CACACCGTTC
GGCCCCGACG GGTATGACAT CGCCTGCGTG TCCGCCGGGC TGGCGAAGGC TGCGCTGTTT
GCCACGCTCA AAGGCGACGT GAAAAACGCC TATGCCCTGT CGCGGCCCCC CGGCCACCAT
TGCCTGCCGG ATTTTCCCAA TGGCTTCTGC CTGCTCGCCA ATATCGCCAT CGCGATCGAG
GCTGCCCAGA CCGTCAAGCT GACCGACCGT GTCGCGGTGA TTGACTGGGA CGTCCATCAT
GGCAACGGAA CCGAGGCGAT ATTCTACGAC CGTGACGATG TCCTGACGAT TTCATTGCAT
CAGGAGCGCA ACTACCCGCT CGACACCGGC GATTTTGAAG ATCGCGGATC CGAGGCGGGT
GTGGGCTACA ACCTCAACAT TCCACTGCCC CCCGGCACCG GCCACGCAGG GTATGAGGAG
GCGTTCGAGC GGCTGGTGAT CCCGTCCCTT CACGCCTTCC AACCCGATGC GATCATTGTG
GCCTGCGGCT ATGACGCATC CCTCGTCGAT CCGCTGAGCC GAATGATCGC AGGCGGCGAC
ACTTTTCGCG CGATGACAGA CATGACGATG GAAGCCGCGG ATGATCTGTG CGGGGGCCGC
CTGACCGTGG TGCACGAAGG CGGCTACTCC GAGGTTCACG TCCCCTTCCT TGGCCACGGC
GTGCTGGAAT CGATGTCCGG CAGCGACATC CATGCGCCCG ATCCGTTCCA GTACAAATTC
GAAGGCCAGC AACCGGGCGC ACGCTTCAAT CGCTACGTCT CGACCCTGAT CGCCGAGATG
GAAGATGCTC TGGGGCTGTA G
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| Protein sequence | MTTGFFWDER CFWHSGGNYA GLLQVGGLIQ PGGGLPENPE TKRRLVNLLR VTGLWEGLAT
QQATPVTQDD LLRIHPSDYL ASFRAKSAEG GGELGLRTPF GPDGYDIACV SAGLAKAALF
ATLKGDVKNA YALSRPPGHH CLPDFPNGFC LLANIAIAIE AAQTVKLTDR VAVIDWDVHH
GNGTEAIFYD RDDVLTISLH QERNYPLDTG DFEDRGSEAG VGYNLNIPLP PGTGHAGYEE
AFERLVIPSL HAFQPDAIIV ACGYDASLVD PLSRMIAGGD TFRAMTDMTM EAADDLCGGR
LTVVHEGGYS EVHVPFLGHG VLESMSGSDI HAPDPFQYKF EGQQPGARFN RYVSTLIAEM
EDALGL
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