| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1002 |
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| Symbol | |
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| ID | 3933446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 959842 |
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| End bp | 960657 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903350 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_508944 |
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| Protein GI | 89053493 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.578014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.810596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAC GGATTTGGAT AGCGACCGTG CTTGCGGTCG GGATGGCATG GCAGGTTGCC
GCCCAGGACA GTGGGATACG GTTCGTTCGC GCGCCTGAAG CGGGTGATAC GGGTCCGCGT
ATCACGATTC AGATCACGGA AGAGGATATG GCGCGCCAGG GTGCCCCGGC GGAGGCGCCG
GCAACTGCAC TCGGTCCCGT CGCGCCACCG TCAGATATGG CCTATGACGG GGCGTCGGCC
TGGTTCTGGG CAGAAGTGCC AAGCCAGATG CCCGCAGATC CCACCCGCTT CTGGGCCGCG
CAGGAACATC TGGCGCTTGC GCCTGAGGCC AGCGGTTTGG GCGCGCCGCG TCTGGATACC
GTCAGCCGGA TCGCCGCAAC CCACGGGCGA GAGATTCTGG CGGCCACCAT CGGCACCCAG
GTCTCTCCTG CATTCGCGTT GGCGGTGATT GCGGCGGAAA GCGCGGGCCG CCCGGAGGCG
GTCAGCGGGG CAGGCGCGCA GGGGTTGATG CAATTGATCC CTGCCACCGC AGAACGGTTC
GGGGTGGAAG ATTCCATGGA CCCCTCCCAA AACATTGCAG GTGGCGTCGC CTATCTCGAC
TGGCTGATGG GAGAGTTCGA CCGCGATCCG ATTCTGGTCC TGGCCGCGTA TAATGCGGGG
GAGGGGGCGG TGACGCGGGC GGGTGGCGTG CCTGACTATG ACGAGACGCG CACCTATGTG
CCGAGGGTGC TGGCCGCGTG GGGCCTGGCG CGCGGCCTAT GCAACACGCC CCCGGATCTG
GTATCGGACG GATGCGTGTT CCAGGTGATG AACTGA
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| Protein sequence | MARRIWIATV LAVGMAWQVA AQDSGIRFVR APEAGDTGPR ITIQITEEDM ARQGAPAEAP
ATALGPVAPP SDMAYDGASA WFWAEVPSQM PADPTRFWAA QEHLALAPEA SGLGAPRLDT
VSRIAATHGR EILAATIGTQ VSPAFALAVI AAESAGRPEA VSGAGAQGLM QLIPATAERF
GVEDSMDPSQ NIAGGVAYLD WLMGEFDRDP ILVLAAYNAG EGAVTRAGGV PDYDETRTYV
PRVLAAWGLA RGLCNTPPDL VSDGCVFQVM N
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