| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0934 |
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| Symbol | |
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| ID | 3933378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 888583 |
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| End bp | 890100 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903282 |
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| Product | ABC transporter related |
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| Protein accession | YP_508876 |
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| Protein GI | 89053425 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0331703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CGCTGCTTAA TATCCAGGGG CTGACCAAGG CCTACCCCGG CGTTGTGGCG
AACGACGCCG TGTCCTTCGT CATCCAACCG GGCGAAGTTC ATGCGCTGTT GGGAGAGAAC
GGCGCAGGCA AATCCACGCT CGTGAAAATG ATCTACGGAT TGGTGTCCCC CGACAGCGGC
ACCATGGCGC TGAACGGCAC TCGCTACACC CCGTCCGAGC CCCGCGCCGC CCGCACCTCA
GGCGTGGCGA TGGTGTTTCA ACACTTCTCC TTGTTTGAGG CATTGTCCGT CGCCGAGAAT
ATCGCCCTGG GGATGGAGGC CCCACCAAAG CCGCGCGATC TGTCTAGGCG CATCACGGAT
GTCAGCGCCG CCTATGGTCT GCCGCTGGAC CCCGAGAGCC TCGTGGGTGA CCTCTCTGCC
GGTGAACGTC AGCGGGTCGA AATCATCCGC TGCCTCCTAC AGGACCCCAA ATTGCTGATC
ATGGATGAGC CGACCTCCGT CCTGACGCCG CAAGAGGTCG AAATCCTCTT CCACACCCTC
CGCAAGCTCA GCGCGGAGGG CACCGCGATC CTTTACATCT CTCACAAGCT GGAGGAGATC
CGCGCGCTGT GTGATGCCGC CACCATCCTG CGTCTGGGCA AGGTTGTGGG GGAATGCGAT
CCGAAAAAGA CCTCCGCCGC GCAGATGGCC GAGATGATGG TGGGCAAATC CCTGGCCGTA
CCCGCCCGCG CTGCCACTGC GCCGGGTGCG CCACTCCTCA CGCTGAACGC CCTCACTCAG
ACCGCCGCCA CGCCCTTTGG CACGTCCCTC AAGGACATCT CGCTGGAGGT TTGCGCCGGT
GAAGTGCTGG GCATCGGCGG TGTCGCGGGC AATGGTCAGG ATGAGCTGCT GGCCGTCCTC
TCCGGCGAAC GTCGCTCGCC CACCGGGACC CTCACTTTCA ATGGACGTGA CGTTGGCGAG
GACGGACCGA ATGCACGCCG CGCCAGCGGT CTGCTTTCGG CGCCGGAGGA GCGGTTGGGC
CACGCCGCCG CCCCCGACAT GAGCCTGACG GAAAACGCCG TCCTCACCGG GCAGGCCCGC
AAGGGCTTGG CCAAAAATGG CTTCATCGGC TGGCACAAGG CCCGCGCCTT CGCCGACGAG
ATCATCACCG CCTTCGACGT GCGTACCCCC GGCAACGCCA CCGCCGCCCG CGCGCTGTCG
GGCGGAAACC TGCAAAAGTT CGTCATCGGG CGCGAGATCC TGCAAGATCC CAAGGTCCTC
GTTGTGAACC AGCCCACCTG GGGCGTCGAT GCGTCTGCCG CCGCCGACAT CCGGCAAGCG
CTCCTCAACC TCGCGGAAGG CGGCGCGGGC GTGATTGTAA TCAGCCAGGA CCTCGACGAA
CTCCTCGAAA TCTCGGATCA GTTCTGCGCC CTGAATGAAG GCCGCCTCTC CGCACCCCAA
CCTGCCCGTG GCCTCAGCAT GGAAGACATT GGCCTGATGC TCGGTGGTGC CCATGGGATG
GAGGAGGCCA CCCTATGA
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| Protein sequence | MTAPLLNIQG LTKAYPGVVA NDAVSFVIQP GEVHALLGEN GAGKSTLVKM IYGLVSPDSG
TMALNGTRYT PSEPRAARTS GVAMVFQHFS LFEALSVAEN IALGMEAPPK PRDLSRRITD
VSAAYGLPLD PESLVGDLSA GERQRVEIIR CLLQDPKLLI MDEPTSVLTP QEVEILFHTL
RKLSAEGTAI LYISHKLEEI RALCDAATIL RLGKVVGECD PKKTSAAQMA EMMVGKSLAV
PARAATAPGA PLLTLNALTQ TAATPFGTSL KDISLEVCAG EVLGIGGVAG NGQDELLAVL
SGERRSPTGT LTFNGRDVGE DGPNARRASG LLSAPEERLG HAAAPDMSLT ENAVLTGQAR
KGLAKNGFIG WHKARAFADE IITAFDVRTP GNATAARALS GGNLQKFVIG REILQDPKVL
VVNQPTWGVD ASAAADIRQA LLNLAEGGAG VIVISQDLDE LLEISDQFCA LNEGRLSAPQ
PARGLSMEDI GLMLGGAHGM EEATL
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