| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0910 |
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| Symbol | |
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| ID | 3933354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 865519 |
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| End bp | 866319 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903258 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_508852 |
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| Protein GI | 89053401 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.31827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGTT TTTTCGCCGC CGCCTTGGCC GCCCCTCTGG CCGCTTTGAT GCCTTTTGCC
GCCGCCGCCG ATGGGCATTT GCCTGATCTG GGCGGGCAGG AGGTCGTGAT CGTCACGGAA
AACGCCTATC CGCCGTTGCA ATTCGTGGAC CCCGTGAGTG GCCTTGCGAT TGGGTGGGAA
TATGACGCGG TGGAGATCCT GGCGGAGCGC CTGAACTTCA CGCCCGTCAT CGAGAATATC
AGCTGGGACG CGATGATCCC CGCCGTCTCG GGCGGGCAGT ACGATATGGG CATGACGGGC
ATCACCATCC GCGAAGATCG CGATGAGCTG GTCGATTTCT CCGTCCCCTA CATGGTCAGC
CAGATGCGCA TGCTGGTGGC CGCCGATGAG ACGCGCTTTG ACGATGCCGA GAGCTTTGCC
GCAGACGAGG ATCTGTTGAT CGGGACGCAG GCGGGCACCA CGCCGTTCTA TGTGGGCGTT
TACGATGTGC TGGATGGGGA TGAGGCCAAT CCGCGCCTTG TTCTGCTGGA GACGATCCCG
GCGGCGATCC AGGCGCTGAT CACCGGCGAT GTGGATATGG TGCTGGCCGA TAGCGCGGGT
GGGCAGGGCT ATGTCAGCGC CAATCCCGAC CGGTTGCAGA TGATCGGGGA GCCGCTTGGC
ACCGAGGAAT TTGGCTTCAT CTTCCCCAAT GACAGCGAGC TGACGGCGGC GATCAACGCC
GGTCTGGACA GCATGCGCGA GGATGGGACC CTGGAGGAGT TGGACCAGCG CTGGTTTGTC
GATTACGCGC TCGGCCAGTA A
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| Protein sequence | MTRFFAAALA APLAALMPFA AAADGHLPDL GGQEVVIVTE NAYPPLQFVD PVSGLAIGWE
YDAVEILAER LNFTPVIENI SWDAMIPAVS GGQYDMGMTG ITIREDRDEL VDFSVPYMVS
QMRMLVAADE TRFDDAESFA ADEDLLIGTQ AGTTPFYVGV YDVLDGDEAN PRLVLLETIP
AAIQALITGD VDMVLADSAG GQGYVSANPD RLQMIGEPLG TEEFGFIFPN DSELTAAINA
GLDSMREDGT LEELDQRWFV DYALGQ
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