| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0836 |
|---|
| Symbol | |
|---|
| ID | 3933279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 791371 |
|---|
| End bp | 792333 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637903183 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508778 |
|---|
| Protein GI | 89053327 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.102237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAA AGGCAGTTGT CGCGTGCATG CGGAACGAGG CGATCTTCCT TCTGGAATGG
ATCGCTTACC AACTGGTGAT CGGCTTCGAC CTTGTGGCTG TTGTGACGAA CGATTGCACG
GATGGGACCG ACCGAATTCT GGACCGCCTG GCGGAGTTCG ACGACCGGAT AATCCATATC
CGAAACGAGA TCGGTGAGGG TGAGAGCCCA CAATTGGCAG GCATGCGGCA CGCGCTGAAC
CACCCGCGCA TCGCCGAGGC GGAGTATCTG CTGCATTGCG ATGCGGACGA GTTTCTCCAC
GTCTCCCGGG GGGCTGGACG GGTGGATGAT CTGTTGGCCC ACACCAAGGG CGCAGATTGC
ATTGCGTTGT CCTGGCGGCC CTTTGGCGAT GCGGGGATTG AGAAATGGCC CGGCGGGTCG
GTGATCGCGC AATGCACCAT GGCGGATGCG AAGCTGCGCC TTCACACGGC CCTGCACAAG
TGCATGTTCC GACCAGATCG GTTTGGCTAT GCCATTGATC ATATGCCGAA AGATCCGGTG
GCCGACGATA TTACGATGGT GAACGCCCGG GGCGACGCGA TCCCGGCGCA CGATCTGTTT
CGCGCCTCAT CCTCCCGGTT TCGCAACATC GACCCGGGGC TTTATTCCTG GGATGTGGCC
TGCATTCATC ACTACGCGAT CCGGGCCAAA GATGTGTTTC TGATGAAGAA TGTCCGGGGC
GATGGAATGG CGATGCCGTC TGAGAAATAC TTCGTCAATT CGTCTTTCTG GCGGCGTTAC
AACCGCAATC AGGTGGAGGT GCCCGAGGCG CAGCAGCACC TCTGGGCCGT GACCCGTATC
ACGCAGGAGT TGCGCGCGCT GTCCAATCGG ATCAAGCGGG TCGAGCGGGA TGCCCTGGCC
GCCTATTTTG AGGCGCGCGA TACCATTCTG GATGCAGAGC AGGTGGCGAA GTGGACGGCC
TAG
|
|---|
| Protein sequence | MAQKAVVACM RNEAIFLLEW IAYQLVIGFD LVAVVTNDCT DGTDRILDRL AEFDDRIIHI
RNEIGEGESP QLAGMRHALN HPRIAEAEYL LHCDADEFLH VSRGAGRVDD LLAHTKGADC
IALSWRPFGD AGIEKWPGGS VIAQCTMADA KLRLHTALHK CMFRPDRFGY AIDHMPKDPV
ADDITMVNAR GDAIPAHDLF RASSSRFRNI DPGLYSWDVA CIHHYAIRAK DVFLMKNVRG
DGMAMPSEKY FVNSSFWRRY NRNQVEVPEA QQHLWAVTRI TQELRALSNR IKRVERDALA
AYFEARDTIL DAEQVAKWTA
|
|---|
| |