| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0778 |
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| Symbol | |
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| ID | 3933221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 737772 |
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| End bp | 738596 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903125 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_508720 |
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| Protein GI | 89053269 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.566812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGGC TTCCGTTTGC CCTTGTCATT GGCGCGCTGA TCACGCTGGT GTTCATCGTT
TTGGCGCTGG TGTCGCTGGT CTGGACGCCC CATGACACGG CCAGCCTGAC GATTTCGAAC
CGGCTGCAAC CGGCCTCCGG CACCCACTGG TTCGGGACCG ACCAATTCGG ACGCGATCTG
GTGTCGATGC TGATGGAGGG CACGCAGACC TCCATCGCCG TGGCGCTGGT GGCCGTGGGG
ATCGGGGTTT GTCTGGGGGT GCCTTTGGGG CTGGCCGCCG CCGCATCACG GGGGTCGCTG
CTGGACGAGG TCATCATGCG CGGCAACGAC CTGATTTTCG CCTTCCCGTC GCTGGTCATC
GCGATCCTGA TCACGGCGAT CTACGGCCCG TCCGCCACCA ACGCGATCCT CGCCATCGGC
ATCTTCAACA TCCCCGTCTT CGCCCGTGTG GCCCGCGGCG GCGCGCTGCC GATCTGGACA
CTGGATTACA TTCTGGCGGC GCGCACGGCG GGCAAGGGCC CCGCGCGGAT CAGCGTCGAA
CACATCCTAC CCAATATCGC CAACCTGTTG ATCGTGCAGG CAACAATCCA GTTTTCGCTG
GGGATATTGG CGGAGGCGGG GTTGTCTTAC GTGGGGCTCG GCGCGCAGCC CCCGACGGCG
TCCCTTGGCA AGATGTTGGC CGACGCGCAG ACGATGATCT ATTCGCACGC CCATCTGGCG
CTGCTGCCGG GCCTGTCGAT CGTGCTGCTG GTTCTGGGGT TGAACCTGAT GGGCGACGGG
CTCCGCGATG CGCTGGATCC GCGCCTGCGG AGGGCCCGAG AATGA
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| Protein sequence | MRRLPFALVI GALITLVFIV LALVSLVWTP HDTASLTISN RLQPASGTHW FGTDQFGRDL
VSMLMEGTQT SIAVALVAVG IGVCLGVPLG LAAAASRGSL LDEVIMRGND LIFAFPSLVI
AILITAIYGP SATNAILAIG IFNIPVFARV ARGGALPIWT LDYILAARTA GKGPARISVE
HILPNIANLL IVQATIQFSL GILAEAGLSY VGLGAQPPTA SLGKMLADAQ TMIYSHAHLA
LLPGLSIVLL VLGLNLMGDG LRDALDPRLR RARE
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