| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0740 |
|---|
| Symbol | |
|---|
| ID | 3933183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 710794 |
|---|
| End bp | 711729 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637903087 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_508682 |
|---|
| Protein GI | 89053231 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGCGTG AGCAGCCCGG CGATTTTGCC CCCACGCCAG ATCTGTTTGC CGCCTATCTT
GGGATGGAGA CGGATCTGAT CTTCACCCAT GGGATGGATC TGCCAGGCTT TGCGTCCTTC
CCGATGGTCG AAACGCAGGA GGGGCGGGAC CTGCTGCAGA GCTATTACAT CAACATGATC
CAGTTGGGGC GGCGGTCCGG TCTTGGTGTT ATCCTTGAAA GCGCCACCTG GGTCGCGAAC
CGGGATCGCA GTGCGCCTCT TGGGTATGGA CCGGACCAAT TGGCGGAGAT CAACCGGGCC
GCTGTGGCCG AAATGGTGAA GGCCAAGATG GCGACCGCAG AGGTGCCCAT TCGTTTAAGC
CTCAACCTTG GCCCCCGTGC CGATGCCGAT GCCCCGTCCG AGCAGATGAG TGCGGCAGAG
GCGGAAGCCT ACCACACCGA GCAGATCGCA GCCGTCGCGA AGAGCGGCAT CGATATGGTC
AGTGGCTACA CGCTGACCTA CACCGCAGAA GCCGTGGGTG TGGCGCGTGC GGCAAAGGCC
CAAGGCGTGC CGGCGGTGAT CGCCTTCAAG GTGGAGTTGG ATGGTCGCTT GCCCACCGGC
ATGACACTGG AAGACGCCAT TGCCGAGGTC GATGCGCAAA CCGAAGCCTA CCCGGACTAC
CACATGATCA ATTGCGCGCA CCCCGACCAT TTCAGTGCCA CGTTGGACGG AGGTCCCTGG
ATGGACCGCA TCGGAGGTAT CGTCGCCAAC GCGTCCCGCT GTAGTCACGA ACAGCTAGAC
AACGCCACTG AGCTTGACGG CGGCAATCCG GAGGAGTTGG GGCATGTGCT GGCAGATCTG
CGGCGGCGGT TTCCGAGGAT CCGCGTGTTG GGTGGGTGCT GTGGCACCAA TATGCGCCAC
ATGGAGGCGA TCGCCCAGGC CGCTTCGGCG CAGTAG
|
|---|
| Protein sequence | MTREQPGDFA PTPDLFAAYL GMETDLIFTH GMDLPGFASF PMVETQEGRD LLQSYYINMI
QLGRRSGLGV ILESATWVAN RDRSAPLGYG PDQLAEINRA AVAEMVKAKM ATAEVPIRLS
LNLGPRADAD APSEQMSAAE AEAYHTEQIA AVAKSGIDMV SGYTLTYTAE AVGVARAAKA
QGVPAVIAFK VELDGRLPTG MTLEDAIAEV DAQTEAYPDY HMINCAHPDH FSATLDGGPW
MDRIGGIVAN ASRCSHEQLD NATELDGGNP EELGHVLADL RRRFPRIRVL GGCCGTNMRH
MEAIAQAASA Q
|
|---|
| |