| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0732 |
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| Symbol | |
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| ID | 3933175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 701702 |
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| End bp | 702697 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903079 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_508674 |
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| Protein GI | 89053223 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.576299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGC CCCTCCCGCT TCTGTCGCTC GTGCTGGCAA CCATCGCCTG CGGCCTTGTC
TGGCGTTTGG ACATCGGGCA GCCCCTGGCG CGCGCGCTGT TCACCGGGGT CTTTGCGTTG
ATCGGGTTGA GCACCGTTCT GACCGGGTTG CGATGCGGCT ATGGGATGGA GGCGCTTCTG
GTCGGGCAAC GCCTGATCCC GATTGTCGTG GGACCGTTGA TCTACCTGGG CTTTCTCAGC
CTCACGGGCA CCGCCATGGC GCGTCCCCTG ATGATCCACC TCGGCATCGC TGTCTTCGCC
GGGGCGGTGC CGCAACTGAT CCCCGGGGCG CAGGGGGCCT ATGATGCGGT GATCGTCGTC
AGCTACCTCT GCTACGCGAT CCTCCTCGTC CGGCTCTGGC GGCGAGGGTC CGATGCGCTG
TCGCTTGCGC CGCTGCATCT GACGCGCGGT TTGCGGACCT GGATGCTAGT GGCCGCCGCT
ATGCTCGCCG TGATGATGGC CTTCGACACC GCCATTGCCG TTAGCTTCGC AATCGGACGC
CCGGAGGAGG CTGAGGCATT GATCGGCTAC GGCTCTCTCC TCTCGGCGCT CAGCCTGATT
GCCGCCATTG TCGCCGTATC CTCCCGCGCG CCGCCCCCCG TGCCGCAACC TGTGGCGCCG
CGGACCGACA CGCTGGAACA AAAGGCCCGG ACTTTGCTGG AAGACCAGCG ACTGTTCCTC
GATACCGATC TGACGCTGGA TCGTCTGGCA AAGCGGTTGC ACGTGCCCGC CCGTGCCCTG
TCAGAGGTGA TCAACCGGAC CCAGAACATG AACGTCTCGC AATATGTGAA CGGCTTTCGC
CTGTCGCACG CCGCGCATTT GCTGGAGACG ACGGATCTGA CCGTGACCCA GGTGACCGAG
CAATCGGGGT TCCTGACCCG GTCCAACTTC TACCGGGAGT TTGAGCGCGT CTTCGCCATG
TCCCCCACGG CCTATCGGAA AGCCAAGCGA CCCTAG
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| Protein sequence | MALPLPLLSL VLATIACGLV WRLDIGQPLA RALFTGVFAL IGLSTVLTGL RCGYGMEALL
VGQRLIPIVV GPLIYLGFLS LTGTAMARPL MIHLGIAVFA GAVPQLIPGA QGAYDAVIVV
SYLCYAILLV RLWRRGSDAL SLAPLHLTRG LRTWMLVAAA MLAVMMAFDT AIAVSFAIGR
PEEAEALIGY GSLLSALSLI AAIVAVSSRA PPPVPQPVAP RTDTLEQKAR TLLEDQRLFL
DTDLTLDRLA KRLHVPARAL SEVINRTQNM NVSQYVNGFR LSHAAHLLET TDLTVTQVTE
QSGFLTRSNF YREFERVFAM SPTAYRKAKR P
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